Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq59 221 2e-52 >seq59 Length=213647 Score = 221 bits (244), Expect = 2e-52 Identities = 563/850 (66%), Gaps = 35/850 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| || || ||||| | ||||||| | |||||| Sbjct 94666 ATATGGAACATGTACAAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATCTG 94607 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | || | | ||| ||||| || || || Sbjct 94606 TCAAAGGATCTCCACGACTGGAACAAGCGACTCAATGACGACGAGCGCTTCTTCATCTCA 94547 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| | | || ||||| |||| ||||| || || |||||||| || ||| | ||| Sbjct 94546 CACGTCCTTGCATTCTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTGGTCGAGCGA 94487 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||| ||| || || || || | ||||| ||||| ||||| |||||||| Sbjct 94486 TTCAGCGCCGAGGTGCAAATACCCGAAGCACGATGCTTCTACGGCTTCCAGATCATGATG 94427 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---G 125315 |||||| | ||||| || | ||||| || || |||| ||||| |||| || | Sbjct 94426 GAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCTAAG 94367 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 ||||| | | || || || ||||| ||||||| | || | || || | ||||||| Sbjct 94366 CAACGAACATACCTGTTC---AACGCCATCGACAACATCCCATGCATTCGCAGAAAGGCT 94310 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| | || |||||| ||| | | || ||| ||| ||||| | || Sbjct 94309 GACTGGGCCCTGCGATGGATCTCGGACAAGGACTCGACGTTCGCTATGCGACTGATTGCC 94250 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 || || || || ||||| |||||||| || || || || ||||||| ||| | ||| Sbjct 94249 TTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCATCCATCTTCTGGTTGAAG 94190 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 ||||| || |||||| | || || || | |||||| | || || || ||||||||| Sbjct 94189 AAGCGTGGCCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGC 94130 Query 125556 CTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-----ATCTGCGTCCCGAGTGC 125609 | ||| |||||| || || |||| || || || | || || ||| Sbjct 94129 ATGCACACTGACTTCGCTTGCCTGTTGTTCTCTCACCTCAAGAACAAGCCCACCAAGT-- 94072 Query 125610 AGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAG 125669 | | | || |||| || |||||| || ||||| || || ||||| Sbjct 94071 -----CGGTGGTGCAAAG-----CATCATTGTG---GAGGCCGTCGCCATTGAGCAAGAA 94025 Query 125670 TTTCTAACCGAATCCCTACCG-GTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728 || | ||||| || | || || || || | ||||||||| ||||| |||||| | Sbjct 94024 TTCTTGACCGATGCCTTGCCTTGTGCGC-TGCTCGGCATGAACGCTAAGCTCATGTGCCA 93966 Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGC---AAGATTTA 125785 |||||| ||||| || || || || || ||| || | |||| | ||| | || Sbjct 93965 GTACATTGAGTTCGTCGCTGACCGACTGCTGCTCGCTCT---TGGCAACCAAAAGTTCTA 93909 Query 125786 CAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTT 125845 |||||||| || ||||| || |||||| | ||| || || | || ||||||||||| Sbjct 93908 CAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTT 93849 Query 125846 TTTCGAGAAG 125855 ||||||||| Sbjct 93848 CTTCGAGAAG 93839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057866093440