Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq30 98.7 2e-16 seq78 91.5 2e-14 >seq30 Length=194887 Score = 98.7 bits (108), Expect = 2e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||||| | || || ||||||||||| ||||| |||||||| || Sbjct 140107 GCCAAGCGCCACCGAAAGATCT-TGCGTGACAACATCCAAGGTATCACTAAGCCAGCCAT 140049 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 140048 CCGACGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCTG 140008 Score = 84.2 bits (92), Expect = 3e-12 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588 |||| | || |||| || || | |||| ||| | |||| ||||||| || |||||| Sbjct 139955 TCTGCAGTGATCTACGAGGAAACCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTTATC 139896 Query 16589 CATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATC 16648 | || || || || || |||||||| || || ||||| ||||| ||| | || | Sbjct 139895 CGCGACGCCGTCACATACACTGAGCACGCCAAGCGCAAGACCGTCACATCCCTCGACGTT 139836 Query 16649 GTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| || | || ||||||||||| | |||| ||||| || ||||| Sbjct 139835 GTCTACGCCCTCAAGCGTCAAGGCCGCACCCTTTACGGTTTCGGTGGTTAA 139785 >seq78 Length=157685 Score = 91.5 bits (100), Expect = 2e-14 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 16463 AACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAG 16522 ||||||||||| ||||||||| ||| |||||||| || || |||||||| || |||||| Sbjct 137472 AACATCCAAGGCGTCACCAAGCAAGCCATCCGTCGCCTCGCGCGTCGTGGCGGCGTCAAG 137531 Query 16523 CGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 ||| ||||||| |||| || || | ||| | |||| ||||| Sbjct 137532 CGTATCTCTGGGGACATCTACGATGAAACTCGCGTTGTTCTGAAG 137576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075068339792