Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq59 138 1e-27 >seq59 Length=213647 Score = 138 bits (152), Expect = 1e-27 Identities = 372/566 (66%), Gaps = 6/566 (1%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || ||||| || ||||| |||||||| | || || |||||||| Sbjct 94101 AACAACAGGCAAGCGAAGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAG 94160 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || | ||| ||||||||||| || | ||| || ||||| |||||||| || Sbjct 94161 AAGGTGAGGCCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGCCG 94220 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTC-TCTCCATAACC--GGCG 33471 || |||||||| || || || |||||||||||||| |||| | | | | | | | Sbjct 94221 GAGAAGAAGATACCCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAACGTCGAGTCC 94280 Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33531 |||| ||||| | ||||| || ||||| | | || || || | || Sbjct 94281 TTGTCCGAGATCCATCGCAGGGCCCAGTCAGCCTTTCTGCGAATGCATGGGATGTTGTCG 94340 Query 33532 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 33591 ||||| || || || || || || ||| || | | || || ||||| | || Sbjct 94341 ATGGCGTTGAACAGGTATGTTCGTTGCTTAGGCTCGCTGATGTATGTGTCGATGAGGAGG 94400 Query 33592 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 33651 || | || || || ||||| || || ||||| || |||||||| |||| || Sbjct 94401 GAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCT 94460 Query 33652 TCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCA 33711 |||| || || || || | | ||||| || ||| || || || || || ||||| Sbjct 94461 TCGGGTATTTGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCG 94520 Query 33712 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT--- 33768 || || || || || | || ||| || || | ||||| | ||| Sbjct 94521 GATGCGGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGTCGC 94580 Query 33769 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCC 33828 || ||||| || | || ||| || || | ||| | ||||| | ||||| ||||||||| Sbjct 94581 TTGTTCCAGTCGTGGAGATCCTTTGACAGATCAATCTCTTCGGCAGTCCAGAATGATGCC 94640 Query 33829 TCTGCCTTTTTATACATGTTCCAGAT 33854 || ||||| || ||||||||||| || Sbjct 94641 TCGGCCTTCTTGTACATGTTCCATAT 94666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946078695040