Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq132 86.0 2e-11 >seq132 Length=72508 Score = 86.0 bits (94), Expect = 2e-11 Identities = 205/304 (67%), Gaps = 16/304 (5%) Strand=Plus/Plus Query 111417 AATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC 111476 ||||| | || |||||||| || ||||| | || | ||| || || || ||| Sbjct 51480 AATGTGCACATCTGGGATGGCAACGGATCCAGAGAGTATCTCGACAGCGTCGGGCTTTCT 51539 Query 111477 GACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCA 111536 || |||||||||||| || || ||||| ||||| || |||||| | || |||||||| Sbjct 51540 CACCGCGAAGAAGGTGACCTTGGGCCAGTCTACGGGTTCCAATGGAGACATTTTGGTGCC 51599 Query 111537 GACTACAA----AACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAA 111592 || ||||| |||| || ||| ||| | || ||| |||||||| | Sbjct 51600 GAGTACAAGGACTGCCATACA-GAC---TATACTGGGCAAGGAGTGGATCAATTGGCTGA 51655 Query 111593 TGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAA 111652 ||||| | || | |||||||| || | | | || || || ||| ||| ||||| Sbjct 51656 GGTCATCCACAAACTCAAGAACAATCCTTATGATAGACGAATCATCATGTCTGCCTGGAA 51715 Query 111653 CCCAAATGCA---TTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTT 111708 ||| |||| || |||| ||||| | ||||||||||| | | | ||| ||||| | Sbjct 51716 CCC---TGCAGATATGAAAAAGATGGCTTTGCCACCATGTCA-CATGTTTGCGCAGTTCT 51771 Query 111709 ATGT 111712 |||| Sbjct 51772 ATGT 51775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351195312608