Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq59 138 1e-27 >seq59 Length=213647 Score = 138 bits (152), Expect = 1e-27 Identities = 306/457 (67%), Gaps = 9/457 (2%) Strand=Plus/Minus Query 46142 CGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA 46201 |||| ||||| ||| || | |||||||| ||| ||||| |||| || || ||| Sbjct 94275 CGACGTTCGCTATGCGACTGATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCT 94216 Query 46202 GTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261 || || ||||||| | | || | ||| ||||| | ||||| || || || Sbjct 94215 CATTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGCCTCACCTTCTCCA 94156 Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACA 46321 ||||||| || || |||||||||||| |||| || ||||| || || || | | | Sbjct 94155 ACGAGCTCATCTCCCGCGACGAGGGCATGCACACTGACTTCGCTTGCCTGTTGTT---CT 94099 Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTG---AGCATGTTCAAGGAGGCGG 46378 ||| | | | |||||| | || | | ||| || ||||| | |||||| | Sbjct 94098 CTCACCTCAAGAACAAGC---CCACCAAGTCGGTGGTGCAAAGCATCATTGTGGAGGCCG 94042 Query 46379 TGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACG 46438 | ||||||||| | || || || || | || |||| ||| ||||| |||||||||| Sbjct 94041 TCGCCATTGAGCAAGAATTCTTGACCGATGCCTTGCCTTGTGCGCTGCTCGGCATGAACG 93982 Query 46439 CACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACC 46498 | || |||||| | ||||| ||||| || || ||||||||||| | ||| | Sbjct 93981 CTAAGCTCATGTGCCAGTACATTGAGTTCGTCGCTGACCGACTGCTGCTCGCTCTTGGCA 93922 Query 46499 AGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGG 46558 | | ||| | |||| ||| || || || || ||| | |||||||| || | | Sbjct 93921 ACCAAAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCG 93862 Query 46559 GCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 |||| || || || ||||| ||||| || ||||| || Sbjct 93861 GCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGACTA 93825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011950376960