Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq38 150 1e-31 >seq38 Length=86317 Score = 150 bits (166), Expect = 1e-31 Identities = 221/313 (71%), Gaps = 0/313 (0%) Strand=Plus/Minus Query 6174 AACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCC 6233 ||||| ||| |||| || ||| | |||||||||||||| ||| ||| ||| || Sbjct 28508 AACGTTCGTCGCGATGTCGCCGACCCCTTCTACCGCTACAAGATGGAGCGTATCCAGTCC 28449 Query 6234 AAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCT 6293 ||||| ||||| ||||| ||||| || || |||||||| |||||| || | |||||| Sbjct 28448 AAGGTAGAGGGAAAGGGTAACGGCATCAAGACCGTCATCGTCAACCTGAGCCAGGTCGCT 28389 Query 6294 AAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCT 6353 | ||||| ||||||| | | || | || || ||||| | ||| || |||||| Sbjct 28388 CACCAGCTCGCACGCCCTCCAAATTATGTCATCAAGTACTTCGGATTCGAGCTGGGCGCT 28329 Query 6354 CAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCC 6413 ||||| | | || | |||| | || |||| ||| | ||||| | || | | | | Sbjct 28328 CAGACCAACATCGACCCCAAAGATGACCGCTGGATCATCAACGGCGCTCACGAAGCAGGC 28269 Query 6414 AAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGAT 6473 ||||||||||||| || || ||||| || |||||| || || || ||| ||| | Sbjct 28268 AAGCTGCAGGACTACCTCGATGGCTTCATCAACAAGTTCGTCCTCTGCAAGGAGTGCAAG 28209 Query 6474 AACCCGGAGACCG 6486 ||||| ||||||| Sbjct 28208 AACCCAGAGACCG 28196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946612167664