Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq59 102 1e-16 >seq59 Length=213647 Score = 102 bits (112), Expect = 1e-16 Identities = 364/566 (64%), Gaps = 6/566 (1%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || || ||||| || ||| | |||||||| | || | |||||||| Sbjct 94101 AACAACAGGCAAGCGAAGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAG 94160 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || | ||| ||||||||||| || | ||| || ||||| || ||||| || Sbjct 94161 AAGGTGAGGCCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGCCG 94220 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTC-TCTCCATAACC--GGCG 32828 || ||||| || || || || || ||||||||||| |||| | | | | | | | Sbjct 94221 GAGAAGAAGATACCCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAACGTCGAGTCC 94280 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 |||| ||||| | ||||| || ||||| | | || || || | || Sbjct 94281 TTGTCCGAGATCCATCGCAGGGCCCAGTCAGCCTTTCTGCGAATGCATGGGATGTTGTCG 94340 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || || || || || || || ||| || | | ||||| || || | || Sbjct 94341 ATGGCGTTGAACAGGTATGTTCGTTGCTTAGGCTCGCTGATGTATGTGTCGATGAGGAGG 94400 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 || | || || || ||||| || || || || || ||||||||||||| || Sbjct 94401 GAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCT 94460 Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068 |||| || || || || | | ||||| || | | || || || || || ||||| Sbjct 94461 TCGGGTATTTGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCG 94520 Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT--- 33125 || || || || || | || ||| || || | ||||| | ||| Sbjct 94521 GATGCGGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGTCGC 94580 Query 33126 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 33185 || ||||| || | || ||| || || | ||| | ||||| | ||||| ||||||||| Sbjct 94581 TTGTTCCAGTCGTGGAGATCCTTTGACAGATCAATCTCTTCGGCAGTCCAGAATGATGCC 94640 Query 33186 TCTGCCTTTTTATACATATTCCAGAT 33211 || ||||| || ||||| ||||| || Sbjct 94641 TCGGCCTTCTTGTACATGTTCCATAT 94666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630859462400