Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq59 140 7e-28 >seq59 Length=213647 Score = 140 bits (154), Expect = 7e-28 Identities = 280/407 (69%), Gaps = 16/407 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | |||||||| ||||||||||||||||||||| ||| Sbjct 93843 TCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 93902 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||| | | |||||| || | | | ||||| || || ||||| | Sbjct 93903 GCGTTGTAGAACTTTTGGTTGCCAAGAGCGAGCAGCAGTCGGTCAGCGACGAACTCAATG 93962 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||| || | || ||||||||| | || |||||| | || || | | Sbjct 93963 TACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGCGCACAAGGCAAGGCATCGGTCAAG 94022 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAAT--TGCCTT-CACCTGTGCCAGAGAC 251799 ||||| | || |||| || | |||||||||| ||| || |||| | | | Sbjct 94023 AATTCTTGCTCAATGGCGACGG---CCTCCACAATGATGCTTTGCACCACCGACTTGGTG 94079 Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTCGT 251857 ||||||||| || | ||| ||| | || || || | || ||||| ||||||| Sbjct 94080 GGCTTGTTCTTGAGGTGAGAGAACAACAGGCAAGCGAAGTCAGT--GTGCATGCCCTCGT 94137 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 |||| ||||| ||||||||| | ||||||| ||| | ||||| ||| | | || Sbjct 94138 CGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGCCATGAGGCCACGCTTCTTCAACC 94197 Query 251918 AGAAGAT---TGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 ||||||| |||| || || || ||||| | | |||||||||| Sbjct 94198 AGAAGATGGATGCG---AATGAGCCGGAGAAGAAGATACCCTCGACA 94241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834903641104