Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq59 331 2e-85 >seq59 Length=213647 Score = 331 bits (366), Expect = 2e-85 Identities = 595/857 (69%), Gaps = 22/857 (3%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 || ||| ||||||||||||||| || || |||||| ||||| |||||||| ||| Sbjct 94666 ATATGGAACATGTACAAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATCTG 94607 Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 | ||||| || |||| | | ||| ||| |||| || ||| || | Sbjct 94606 TCAAAGGATCTCCACGACTGGAACAAGCGACTCAATGACGACGAGCGCTTCTTCATCTCA 94547 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || || ||||||||||| || |||||||| ||||| |||||||||| | | Sbjct 94546 CACGTCCTTGCATTCTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTGGTCGAGCGA 94487 Query 42477 TTCATGAAAGAGGTGCAG-TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| |||||||| ||| || || || |||||||||||||||||||| || Sbjct 94486 TTCAGCGCCGAGGTGCAAATACCC-GAAGCACGATGCTTCTACGGCTTCCAGATCATGAT 94428 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC--- 42592 |||||| | ||||| ||| ||| || || || |||| |||||| || || Sbjct 94427 GGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCTAA 94368 Query 42593 -CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651 | ||| | || | ||||||| ||||| || | || || ||||| | |||| Sbjct 94367 GCAACGAACATACC----TGTTCAACGCCATCGACAACATCCCATGCATTCGCAGAAAGG 94312 Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAG 42711 | |||||||| || |||||| | ||| | ||||||| | | ||| | | Sbjct 94311 CTGACTGGGCCCTGCGATGGATCTCGGACAAGGACTCGACGTTCGCTATGCGACTGATTG 94252 Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771 ||||| | || |||||||| ||||||||||| ||| | ||||| |||||||||||| | | Sbjct 94251 CCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCATCCATCTTCTGGTTGA 94192 Query 42772 AGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 || || || || ||| | || ||||||||||| ||||| |||||| | | |||||| Sbjct 94191 AGAAGCGTGGCCTC-ATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAG 94133 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCG 42890 || |||| | ||||| || ||||| ||||||| ||||||| | |||||||| | Sbjct 94132 GGCATGCACACTGACTTCGCTTGCCTGTTGTTCTC---TCACCTCAAGAACAAGCCCACC 94076 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||| | ||| | |||||| ||||||||| | || ||| | || ||| | || Sbjct 94075 AAGTCGGTGGTGCAAAGCATCATTGTGGAGGCCGTCGCCATTGAGCAAGAATTCTTGACC 94016 Query 42951 CAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009 | | |||| ||| | ||| ||||||||||| | ||||||||| ||||||| | Sbjct 94015 GATGCCTTGCCTTGTG-CGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGA 93957 Query 43010 GTACGTCGCCGACCATCTCCTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGT 43068 || |||||| |||| || ||| | | ||| || | |||||||| | | Sbjct 93956 GTTCGTCGCTGACCGACTGCTGCTCGCTCTTGGCAACCAAAAG-TTCTACAACGCCACCA 93898 Query 43069 GCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGC 43128 |||||||||||| |||||||||||||| | | |||||||||||||| |||||||||| Sbjct 93897 ACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGC 93838 Query 43129 GCGTCGCCGACTACCAG 43145 | || | |||||||||| Sbjct 93837 GTGTTGGCGACTACCAG 93821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337500189440