Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq59 107 4e-18 >seq59 Length=213647 Score = 107 bits (118), Expect = 4e-18 Identities = 268/404 (66%), Gaps = 6/404 (1%) Strand=Plus/Minus Query 243353 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 243412 ||||||| ||| || ||| || | ||| |||||||| | || |||||| ||| Sbjct 94206 CCATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCA 94147 Query 243413 TCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGA 243472 || |||||||||||| | ||| | |||| | || ||| || | ||| ||| Sbjct 94146 TCTCCCGCGACGAGGGCATGCACACTGACTTCGCTTGCCTGTTGTTCTCTCACCTCAAGA 94087 Query 243473 ACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAG---AAGCAGTTGAAAACGAAA 243529 |||||| ||| | | |||| |||| ||||| | | || || | | || Sbjct 94086 ACAAGC--CCAC-CAAGTCGGTGGTGCAAAGCATCATTGTGGAGGCCGTCGCCATTGAGC 94030 Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589 | |||||| | ||| || | || || ||| | ||||||||| || | |||||| Sbjct 94029 AAGAATTCTTGACCGATGCCTTGCCTTGTGCGCTGCTCGGCATGAACGCTAAGCTCATGT 93970 Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649 | |||||||| || ||||| || ||||| | | |||| ||||| | | || | | Sbjct 93969 GCCAGTACATTGAGTTCGTCGCTGACCGACTGCTGCTCGCTCTTGGCAACCAAAAGTTCT 93910 Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709 ||||| ||| |||||||| | ||| |||||| ||| || || || || || |||| Sbjct 93909 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACT 93850 Query 243710 TCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 ||||||| |||||||| | || || || ||||||| ||| Sbjct 93849 TCTTCGAGAAGCGTGTTGGCGACTACCAGAAGGCTGGTGTCATG 93806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877965186400