Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq59 129 7e-25 >seq59 Length=213647 Score = 129 bits (142), Expect = 7e-25 Identities = 531/821 (65%), Gaps = 31/821 (4%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| ||||| ||||||||||||||||| ||||| ||| | | ||| |||||||| Sbjct 93824 GTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCAT 93883 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA-AATTGTTGGCACCCCAATCTGTTTGAGGAGAC 125876 || || || ||||| | | ||| | || | |||| || | | || || | Sbjct 93884 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCAAGAGCGAGC-AGCAGTC 93942 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 | || | |||| |||||||||||| |||| || || |||||| |||| || || Sbjct 93943 GGTCAGCGACGAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGCGCAC 94002 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 | || | || || | ||| | | |||||| | ||||| ||| || ||| Sbjct 94003 AAGGCAAGGCATCGGTCAAGAATTCTTGCTCAATGGCGACGGCCTCC---ACAATG---- 94055 Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGA----AGAGTTCCAC-GGCAAA 126051 ||| | | |||| | | | || || |||||| |||| | || ||||| Sbjct 94056 --ATGCTTTGCACCACCGACTTGGTGGGCTTGTTCTTGAGGTGAGAGAACAACAGGCAAG 94113 Query 126052 C----TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTG 126107 | || ||| | |||||||| ||||||||||| || || |||||| || || | Sbjct 94114 CGAAGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAG 94173 Query 126108 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTC 126167 |||||| || ||||||||||||||||| || | ||||| || ||||||||||| | Sbjct 94174 CCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGCCGGAGAAGAAGATAC 94233 Query 126168 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA-AAC 126226 |||| ||| || || |||| || ||| ||| || | || | | |||| | | | Sbjct 94234 CCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAACG-TCGAGTCCTTGTCCGAGATC 94292 Query 126227 CACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAA 126285 || || ||||| | |||||| | || || |||| | | | ||| || || || Sbjct 94293 CATCGCAGGGCCCAGTCAGCCTTTCTGCGAATGCATGGGATGTTGTCGATGGCGTTGAAC 94352 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 || ||| || || | || || ||||||| | || ||||| || ||||| || Sbjct 94353 AGGTATGTTCGTTGCTTA-GGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTCTC 94411 Query 126346 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404 | ||||| | | ||| || | ||| | ||||||| | || |||||| ||| | Sbjct 94412 GGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCTTCGGGTATTT 94470 Query 126405 GTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 126463 | ||||| | || ||| | | | ||||| ||||| || ||||| | || Sbjct 94471 GCACCTCGGC-GCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGATGCGGCG 94529 Query 126464 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 126520 || || || |||| | ||||| | || | || || | | | |||||| Sbjct 94530 AAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGTCGCTTGTTCCAG 94589 Query 126521 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||| |||||||| || ||||| | ||| || |||||||| Sbjct 94590 TCGTGGAGATCCTTTGACAGATCAATCTCTTCGGCAGTCCA 94630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352524763520