Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq59 140 3e-28 >seq59 Length=213647 Score = 140 bits (154), Expect = 3e-28 Identities = 358/538 (67%), Gaps = 13/538 (2%) Strand=Plus/Minus Query 52305 CTGCTGAATGCGTTCGAGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAG 52364 ||| | || || |||| || | || ||| |||||| ||||||| | ||||| || Sbjct 94354 CTGTTCAACGCCATCGACAACATCCCATGCATTCGCAGAAAGGCTGACTGGGCCCTGCGA 94295 Query 52365 TGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAG 52424 |||||| | | | | | ||| | || ||| || | ||||| || |||||| Sbjct 94294 TGGATCTCGGACAAGGACTCGACGTTCGCTATGCGACTGATTGCCTTTGCTGCTGTCGAG 94235 Query 52425 GGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATG 52484 || | || || |||||| || || ||||||| | | || | | ||| | ||| Sbjct 94234 GGTATCTTCTTCTCCGGCTCATTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCCTCATG 94175 Query 52485 CCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTT 52544 | ||||| || ||| ||||||| | || || |||||||| || ||||||| ||||| Sbjct 94174 GCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCATGCACACTGACTTC 94115 Query 52545 GCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTG--- 52601 || ||||| | | | | | | | | ||| || | | | || | || Sbjct 94114 GCTTGCCTGTTGTTCT---CTCACCTCAA-GAACAAGCCCA--CCAAGTCGGTGGTGCAA 94061 Query 52602 AGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTC 52661 ||||| | |||||| || || || || | || || || || | || |||| Sbjct 94060 AGCATCATTGTGGAGGCCGTCGCCATTGAGCAAGAATTCTTGACCGATGCCTTGCCTTGT 94001 Query 52662 GAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGT 52721 | |||||| ||||||||||| || ||||||| ||||||| ||||| || || || || Sbjct 94000 GCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAGTTCGTCGCTGACCGA 93941 Query 52722 CTGTTGGTGCAGCTCG-GGCAGCCAAA-GTACTTCAACGCTCGCAATCCGTTTGAGTTTA 52779 ||| || | |||| |||| ||||| || || |||||| ||| || || || || | Sbjct 93940 CTGCTGCTC--GCTCTTGGCAACCAAAAGTTCTACAACGCCACCAACCCCTTCGACTTCA 93883 Query 52780 TGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || | ||||| || || | |||||||||||||| ||||||||||| || ||||| || Sbjct 93882 TGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGACTA 93825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261506727680