Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq59 114 1e-20 >seq59 Length=213647 Score = 114 bits (126), Expect = 1e-20 Identities = 358/546 (66%), Gaps = 29/546 (5%) Strand=Plus/Minus Query 47046 CTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATG--A 47103 || || |||| |||| | ||| || ||| | ||||||||||| || |||||| || | Sbjct 94354 CTGTTCAACGCCATCGACAACATCCCATGCATTCGCAGAAAGGCTGACTGGGCCCTGCGA 94295 Query 47104 AGTACATTGAAAACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCG 47163 | | | | | | | | || | || || || |||| || || || |||| Sbjct 94294 TGGATCTCGGACAAGGACTCGACGTTC--GCTATGCGACTGATTGCCTTTGCTGCTGTCG 94237 Query 47164 AGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTA 47223 |||| |||||||||| ||| || || | || || | |||| | || | | Sbjct 94236 AGGGTATCTTCTTCTCCGGCTCATTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCCTCA 94177 Query 47224 TGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACT 47283 || | |||||||| || ||||||||| ||||| | ||||| ||| ||||||| ||| Sbjct 94176 TGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCATGCACACTGACT 94117 Query 47284 T----TGCCTGT----CTCT-ACTACAACACTAGAGTCGATCAAAAGTTGGACGTGCCCA 47334 | ||||||| |||| || ||| | | || | | ||| || || |||| | Sbjct 94116 TCGCTTGCCTGTTGTTCTCTCACCTCAAGAACA-AGCCCACCAA--GTCGGTGGTGCAAA 94060 Query 47335 CCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTC 47394 | ||| ||| || ||||||||||||||| || || || |||| || Sbjct 94059 GCATCA---------TTGTGGAGGCCGTCGCCATTGAGCAAGAATTCTTGACCGATGCCT 94009 Query 47395 TGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCG 47454 |||| | | | || |||||||| || | ||| | ||||||| || || |||| Sbjct 94008 TGCCTTGTGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAGTTCGTCG 93949 Query 47455 CCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTT--ACCACACCGAGAATCCATT 47512 | ||||| ||||| | || ||| | |||| | || || || || || || || Sbjct 93948 CTGACCGACTGCT-GCTC-GCTCTTGGCAACCAAAAGTTCTACAACGCCACCAACCCCTT 93891 Query 47513 CGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGG 47572 ||| || ||| | ||||| || |||| |||||||||||||| ||||||||||| || || Sbjct 93890 CGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGG 93831 Query 47573 CGAATA 47578 ||| || Sbjct 93830 CGACTA 93825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499944098560