Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19]
144 sequences; 15,477,581 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq59 114 1e-20
>seq59
Length=213647
Score = 114 bits (126), Expect = 1e-20
Identities = 358/546 (66%), Gaps = 29/546 (5%)
Strand=Plus/Minus
Query 47046 CTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATG--A 47103
|| || |||| |||| | ||| || ||| | ||||||||||| || |||||| || |
Sbjct 94354 CTGTTCAACGCCATCGACAACATCCCATGCATTCGCAGAAAGGCTGACTGGGCCCTGCGA 94295
Query 47104 AGTACATTGAAAACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCG 47163
| | | | | | | | || | || || || |||| || || || ||||
Sbjct 94294 TGGATCTCGGACAAGGACTCGACGTTC--GCTATGCGACTGATTGCCTTTGCTGCTGTCG 94237
Query 47164 AGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTA 47223
|||| |||||||||| ||| || || | || || | |||| | || | |
Sbjct 94236 AGGGTATCTTCTTCTCCGGCTCATTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCCTCA 94177
Query 47224 TGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACT 47283
|| | |||||||| || ||||||||| ||||| | ||||| ||| ||||||| |||
Sbjct 94176 TGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCATGCACACTGACT 94117
Query 47284 T----TGCCTGT----CTCT-ACTACAACACTAGAGTCGATCAAAAGTTGGACGTGCCCA 47334
| ||||||| |||| || ||| | | || | | ||| || || |||| |
Sbjct 94116 TCGCTTGCCTGTTGTTCTCTCACCTCAAGAACA-AGCCCACCAA--GTCGGTGGTGCAAA 94060
Query 47335 CCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTC 47394
| ||| ||| || ||||||||||||||| || || || |||| ||
Sbjct 94059 GCATCA---------TTGTGGAGGCCGTCGCCATTGAGCAAGAATTCTTGACCGATGCCT 94009
Query 47395 TGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCG 47454
|||| | | | || |||||||| || | ||| | ||||||| || || ||||
Sbjct 94008 TGCCTTGTGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAGTTCGTCG 93949
Query 47455 CCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTT--ACCACACCGAGAATCCATT 47512
| ||||| ||||| | || ||| | |||| | || || || || || || ||
Sbjct 93948 CTGACCGACTGCT-GCTC-GCTCTTGGCAACCAAAAGTTCTACAACGCCACCAACCCCTT 93891
Query 47513 CGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGG 47572
||| || ||| | ||||| || |||| |||||||||||||| ||||||||||| || ||
Sbjct 93890 CGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGG 93831
Query 47573 CGAATA 47578
||| ||
Sbjct 93830 CGACTA 93825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499944098560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |