Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq59 134 2e-26 >seq59 Length=213647 Score = 134 bits (148), Expect = 2e-26 Identities = 531/821 (65%), Gaps = 31/821 (4%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || ||||||||||||||||| ||||| || |||| ||| |||||||| Sbjct 93824 GTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCAT 93883 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA-AATTGTTGGCACCCCAATCTGTTTGAGGAGAC 127349 || || || ||||| | | ||| | || | |||| || | | || || | Sbjct 93884 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCAAGAGCGAGC-AGCAGTC 93942 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 | || | |||| |||||||||||| |||| || || |||||| |||| || || Sbjct 93943 GGTCAGCGACGAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGCGCAC 94002 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 | || | || || | ||| | | ||||||| | || || ||| || ||| Sbjct 94003 AAGGCAAGGCATCGGTCAAGAATTCTTGCTCAATGGCGACGGCCTCC---ACAATG---- 94055 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGA----AGAGTTCCACAG----- 127520 || | | |||| | | | || | |||||| |||| | |||| Sbjct 94056 --ATGCTTTGCACCACCGACTTGGTGGGCTTGTTCTTGAGGTGAGAGAACAACAGGCAAG 94113 Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580 | || || ||| | |||||||| ||||||||||| || || |||||| || || | Sbjct 94114 CGAAGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAG 94173 Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640 |||||| || ||||||||||||||||| || | |||||||| ||||||||||| | Sbjct 94174 CCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGCCGGAGAAGAAGATAC 94233 Query 127641 CCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AAC 127699 |||| ||| || || |||| || ||| || || | || | | |||| | | | Sbjct 94234 CCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAACG-TCGAGTCCTTGTCCGAGATC 94292 Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TTCAAA 127758 || || ||||| | |||||| | || ||||||| | | | ||| || || || Sbjct 94293 CATCGCAGGGCCCAGTCAGCCTTTCTGCGAATGCATGGGATGTTGTCGATGGCGTTGAAC 94352 Query 127759 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 127818 || ||| || || | || || ||||||| | || ||||| || ||||| || Sbjct 94353 AGGTATGTTCGTTGCTTA-GGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTCTC 94411 Query 127819 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 127877 | ||||| | | ||| || | ||| | ||||||| | || |||||| ||| | Sbjct 94412 GGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCTTCGGGTATTT 94470 Query 127878 GTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936 | ||||| | || ||| | | | ||||| ||||| || ||||| | || Sbjct 94471 GCACCTCGGC-GCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGATGCGGCG 94529 Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993 || || || |||| | ||||| | || | || || | | | |||||| Sbjct 94530 AAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGTCGCTTGTTCCAG 94589 Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||| |||||||||||| ||||| | ||| || |||||||| Sbjct 94590 TCGTGGAGATCCTTTGACAGATCAATCTCTTCGGCAGTCCA 94630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506095687040