Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq59 302 4e-77 >seq59 Length=213647 Score = 302 bits (334), Expect = 4e-77 Identities = 600/872 (69%), Gaps = 25/872 (3%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || || || ||||| || ||||| || || || || || || | Sbjct 93806 CATGACACCAGCCTTCTGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 93865 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT--GGTGCCG 132708 | || ||| | ||| || || |||||||||| | ||||||| ||| ||| | Sbjct 93866 GAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCC 93925 Query 132709 ATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCA 132767 | || ||| ||||| | ||| || |||||||| ||||| || ||||| | || || Sbjct 93926 AAGAG--CGAGCAGCAGTCGGTCAGCGACGAACTCAATGTACTGGCACATGAGCTTAGCG 93983 Query 132768 ATTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 | | | || ||||| ||||| |||| || ||||| | || |||||| ||||||| Sbjct 93984 TTCATG-CCGAGCAG-CGCACAAGGCAAGGCATCGGTCAAGAATTCTTGCTCAATGGCGA 94041 Query 132827 CCGCGTCGG---TGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCT 132883 | || || ||| | ||| | || || | | | ||| | | | || Sbjct 94042 CGGCCTCCACAATGATGCTTTGCACCAC---CGACTTGGTGGGCTTGTTCTTGAGGTGAG 94098 Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 ||||| || |||||| ||||| |||| ||||||||| | ||| ||||| |||||| Sbjct 94099 AGAACAACAGGCAAGCGAAGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGG 94158 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| || | ||| | ||||||||| || || || | ||| || |||| ||||| || Sbjct 94159 AGAAGGTGAGGCCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGC 94218 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || ||||||| |||||||| || || || || | ||| ||| ||||||| | | Sbjct 94219 CGGAGAAGAAGATACCCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAACGTCGAGT 94278 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGAC-GCACGGCATCGTT 133122 | ||| | |||||| ||||| ||||| || |||||| || || ||| || || | Sbjct 94279 CCTTGTCCGAGATCCATCGCAGGGCCCAGTCAGCCTTT-CTGCGAATGCATGGGATGTTG 94337 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGA 133180 ||||||||||| ||| | | | ||| | | ||| ||| | ||| |||||||||| Sbjct 94338 TCGATGGCGTTGAAC--AGGTATGTTCGTTGCTTAGGCTCGCTGATGTATGTGTCGATGA 94395 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 || || || | || ||||| | ||||||||| ||| || |||||||| ||||| | Sbjct 94396 GGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATC 94455 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATG 133299 | || ||| | ||||| || | || ||| ||||||||||| || |||||||| ||| Sbjct 94456 GTGCTTCGGGTATTTGCACCTC-GGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATG 94514 Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359 |||||| |||||||| || || || ||||| |||||| |||||||| ||| || Sbjct 94515 CCGTCGGATGCGGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTG 94574 Query 133360 AAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAAC 133416 | ||| | ||||||| | ||||| ||||| || | ||| ||| | ||||| || Sbjct 94575 AGTCGCTTGTTCCAGTCGTGGAGATCCTTTGACAGATCAATCTCTTCGGCAGTCCAGAAT 94634 Query 133417 GACGCCTCGGCTTTTTTGTACATACTCCACAT 133448 || |||||||| || |||||||| |||| || Sbjct 94635 GATGCCTCGGCCTTCTTGTACATGTTCCATAT 94666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171899688960