Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq59 221 2e-52 >seq59 Length=213647 Score = 221 bits (244), Expect = 2e-52 Identities = 568/854 (67%), Gaps = 16/854 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 93821 CTGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTC 93880 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| ||||||||||| | ||| || | | | ||| | |||||| Sbjct 93881 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCAAGAGCGAGCAGCAG 93940 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | || |||||| |||| ||||| | ||||||| | ||||||||| | || | Sbjct 93941 TCGGTCAGCGACGAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGCG- 93999 Query 48019 CACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC- 48076 ||| ||||| || | || | || || | ||| || ||||| ||| ||||| Sbjct 94000 CACAAGGCAAGGCATCGGTCAAGAATTCTTGCTCAATGGCGACGGCCTCC---ACAATGA 94056 Query 48077 TGCTTAACGCGG--GACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 ||||| | | |||| | ||| ||||| ||||| | | | || ||| | Sbjct 94057 TGCTTTGCACCACCGACTTGGTGGGCTTGTTCTTGAGGTGAGAGA---ACAACAGGCAAG 94113 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||||| ||| ||||| ||| ||||||| ||||||||||| ||| |||| Sbjct 94114 CGAAGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAG 94173 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 ||||| || | || || | |||||| || | ||||| ||||| ||||||||||| | Sbjct 94174 CCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGCCGGAGAAGAAGATAC 94233 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 |||| || || || || || | || | | |||| | | || |||||| ||||||| Sbjct 94234 CCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAACGTCGAGTCCTTGTCCGAGATCC 94293 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374 | || |||||||| ||||| | |||||||| || | || ||||| ||| | Sbjct 94294 ATCGCAGGGCCCAGTCAGCCTTTCTGCGAATGCATGGGATGTTGTCGATGGCGTTGAACA 94353 Query 48375 GCTTCTTGCACTCACCTGCGTCCGC-AACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 | | | | | | | | ||| | || || || || | ||| |||| Sbjct 94354 GGTATGTTC-GTTGCTTAGGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCG 94412 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||| ||||||||| | || || | ||| Sbjct 94413 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCGGGTATTTGC 94472 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | | ||||| ||| | ||| ||||| ||||| || || || || || || ||| Sbjct 94473 ACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAG 94532 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCC 48610 || |||||||| ||| | ||| |||||||| || |||| || |||||| | Sbjct 94533 AATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGTCGCTTGTTCCAGTCG 94592 Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670 || | || || ||| || | ||||| |||||||||| || || || || ||| Sbjct 94593 TGGAGATCCTTTGACAGATCAATCTCTTCGGCAGTCCAGAATGATGCCTCGGCCTTCTTG 94652 Query 48671 TACATGCCCCATAT 48684 |||||| |||||| Sbjct 94653 TACATGTTCCATAT 94666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531123240960