Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq59 147 3e-29 seq135 93.3 5e-13 >seq59 Length=213647 Score = 147 bits (162), Expect = 3e-29 Identities = 181/244 (74%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||||| || ||| |||||| |||||||||||||| |||| ||||| Sbjct 93816 GCCTTCTGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATG 93875 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808 |||||| | ||| ||||||| | |||||| ||||| | || |||||| | Sbjct 93876 TTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCAAGAGCGA-G 93934 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | ||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 93935 C-AGCAGTCGGTCAGCGACGAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGA 93993 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 ||||| |||| | ||| ||| || |||| ||| || |||||||||| || | Sbjct 93994 GCAGCGCACAAGGCAAGGCATCGGTCAAGAATTCTTGCTCAATGGCGACGGCCTCCACAA 94053 Query 868929 TGAT 868932 |||| Sbjct 94054 TGAT 94057 Score = 114 bits (126), Expect = 2e-19 Identities = 180/255 (71%), Gaps = 7/255 (3%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | | || | | ||| Sbjct 94413 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCTTCGGGTATTTGC 94472 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || ||||||||||| || ||||||||| |||||||| Sbjct 94473 ACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAG 94532 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA---GCGACACCCAGTGG 869809 || || |||||||| ||| ||| |||||||||||| ||| || ||||| | Sbjct 94533 AATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCATTGAGTCGCTTGTTCCAGTCG 94592 Query 869810 ACGGTGTCGGCGCTG--AGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | || | || || || | ||| ||||| ||||||| || ||||||||||| | Sbjct 94593 TGGAGATC--CTTTGACAGATCAATCTCTTCGGCAGTCCAGAATGATGCCTCGGCCTTCT 94650 Query 869868 TGTACATCTCCCATA 869882 ||||||| | ||||| Sbjct 94651 TGTACATGTTCCATA 94665 >seq135 Length=121428 Score = 93.3 bits (102), Expect = 5e-13 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | ||| || ||||||| |||||||| ||||| | || Sbjct 67199 GCTTGGCCAGCTCACCGGGGAGGATGAGTCGCACGGAAGTCTGGATTTCGCGTGATGAGA 67140 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| |||||| || || || | |||||| || ||| ||| |||| | Sbjct 67139 TCGTTGACTTCTTGTTGTAGGCAGCGAGCTTGGAGGCCTCAGTTGCGACGCGCTCGAAGA 67080 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || ||||| | || |||||| | ||||||||| || ||| |||| Sbjct 67079 TGTCGTTCACGAAGGAGTTGAGGATCGACATGGCACGGTTGGAGATACCAGTGTCTGGGT 67020 Query 1254523 GCACCTGCTTGAGCAC 1254538 | ||||||||||| || Sbjct 67019 GGACCTGCTTGAGGAC 67004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107127382685648