Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq38 163 2e-35 >seq38 Length=86317 Score = 163 bits (180), Expect = 2e-35 Identities = 230/323 (71%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||| | || ||| || | || |||||| |||||| ||||| || | Sbjct 28198 GTCTCTGGGTTCTTGCACTCCTTGCAGAGGACGAACTTGTTGATGAAGCCATCGAGGTAG 28257 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| | | ||||| | |||||||| ||| | || || | |||| ||| Sbjct 28258 TCCTGCAGCTTGCCTGCTTCGTGAGCGCCGTTGATGATCCAGCGGTCATCTTTGGGGTCG 28317 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | || || |||||||||||| | ||||||||||| | ||| | | || ||| Sbjct 28318 ATGTTGGTCTGAGCGCCCAGCTCGAATCCGAAGTACTTGATGACATAATTTGGAGGGCGT 28377 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | ||| | |||| | | || |||||||||||| |||||||||||||| |||||| Sbjct 28378 GCGAGCTGGTGAGCGACCTGGCTCAGGTTGACGATGACGGTCTTGATGCCGTTACCCTTT 28437 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 || || ||||||| ||| ||| ||| |||||||||||||| | ||| || |||| | Sbjct 28438 CCCTCTACCTTGGACTGGATACGCTCCATCTTGTAGCGGTAGAAGGGGTCGGCGACATCG 28497 Query 34621 CGGTTAACGTTCACAGTCCCCAT 34643 || |||||| ||||| |||| Sbjct 28498 CGACGAACGTTGACAGTAGCCAT 28520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840875462992