Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq135 147 3e-29 seq59 138 2e-26 >seq135 Length=121428 Score = 147 bits (162), Expect = 3e-29 Identities = 175/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| | | Sbjct 67237 GTACTTGGTGACAGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCACCGGGGAG 67178 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || ||||||| |||||||| ||||| | |||||| |||||| || | Sbjct 67177 GATGAGTCGCACGGAAGTCTGGATTTCGCGTGATGAGATCGTTGACTTCTTGTT-GTAGG 67119 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | |||||| || ||| ||| |||| |||||||| || || ||||| | Sbjct 67118 CAGCGAGCTTGGAGGCCTCAGTTGCGACGCGCTCGAAGATGTCGTTCACGAAGGAGTTGA 67059 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||| | ||||||||| || ||| ||||| ||||||||||| || Sbjct 67058 GGATCGACATGGCACGGTTGGAGATACCAGTGTCTGGGTGGACCTGCTTGAGGAC 67004 >seq59 Length=213647 Score = 138 bits (152), Expect = 2e-26 Identities = 230/328 (70%), Gaps = 7/328 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | |||||| ||| |||||| | ||||||||| |||||| Sbjct 94131 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGCCATGAGGCCACGCTTC 94190 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || | ||| ||||||| ||| ||| ||||| ||||| |||||||| || |||||| Sbjct 94191 TTCAACCAGAAGATGGATGCGAATGAGCCGGAGAAGAAGATACCCTCGACAGCAGCAAAG 94250 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | || ||| || || || | || || | | | |||||| || ||||| Sbjct 94251 GCAATCAGTCGCATAGCGAACGT--CGAGTCCTTGTCCGA-GATCCATCGCAGGGCCCAG 94307 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT--GGTCCTTCT 794578 || |||||| | | | | || | ||||||||||| || |||| | || || Sbjct 94308 TCAGCCTTTCTGCGAATGCATGGGATGTTGTCGATGGCGTTGAACAGGTATGTTCGTTGC 94367 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | || || ||| ||| |||||||||||||| ||||| ||||| ||||||||||| | Sbjct 94368 TTA--GGCTCGCTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCT 94425 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || |||||||||||| || ||||| Sbjct 94426 CCATCATGATCTGGAAGCCGTAGAAGCA 94453 Score = 129 bits (142), Expect = 9e-24 Identities = 182/252 (72%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || ||||| || ||| |||||| |||||||||||||| ||| Sbjct 93808 TGACACCAGCCTTCTGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGA 93867 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC-- 794008 | ||||| |||||| | ||| ||||||| | |||| ||| | | || Sbjct 93868 GAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCAA 93927 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 |||||| ||| |||| ||||| |||||||| |||||||||||||||||||| ||||| Sbjct 93928 GAGCGA-GCA-GCAGTCGGTCAGCGACGAACTCAATGTACTGGCACATGAGCTTAGCGTT 93985 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||||| ||||| |||| | ||| | | || |||| ||| || ||||||| Sbjct 93986 CATGCCGAGCAGCGCACAAGGCAAGGCATCGGTCAAGAATTCTTGCTCAATGGCGACGGC 94045 Query 794129 CTCGATGATGAT 794140 ||| | ||||| Sbjct 94046 CTCCACAATGAT 94057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916231082063216