Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq59 183 3e-41 >seq59 Length=213647 Score = 183 bits (202), Expect = 3e-41 Identities = 375/546 (69%), Gaps = 21/546 (4%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| ||||| || || ||||| || ||||| || ||||| | | || ||||| | Sbjct 93821 CTGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTC 93880 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTA-TTTCGGCTGGCCCAACTGTACG-AGC 120468 ||| || ||||| |||||| | ||||| || | ||| || || |||| | | ||| Sbjct 93881 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTG--CCAAGAGCGAGCAGC 93938 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528 |||||||| || || ||||||||||||| ||||||| || ||||||||||| |||| | Sbjct 93939 AGTCGGTCAGCGACGAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGC 93998 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCC---TTGA-A 120584 || ||||| || || || || || | ||||||| | || |||||| ||| Sbjct 93999 GCACAAGGCAAGGCATCGGTCAAGAATTCTTGCTCAATGGCGACGGCCTCCACAATGATG 94058 Query 120585 CATGGCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644 | | || | || | | | ||| ||||| | || | | | | | ||||||| Sbjct 94059 CTTTGC-ACCACCGACTTGGTGGG---CTTGTTCTTGAGGTGAG---AGAACAACAGGCA 94111 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 || ||||| ||||||| |||||||||||| || || ||||||||| || || ||||| Sbjct 94112 AGCGAAGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCC 94171 Query 120705 GGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACAC 120764 | ||||| ||| | |||| | |||| |||| || || ||| || ||||| | Sbjct 94172 AGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGCCGGAGAAGAAGAT 94231 Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC--- 120821 ||||| || |||||||| | || ||| || ||||||| ||| | |||| Sbjct 94232 ACCCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAACGTCG-AGTCCT--TGTCCGA 94288 Query 120822 GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTT 120881 |||||| || |||||| || |||||| |||| | ||| || || |||| ||||| Sbjct 94289 GATCCATCGCAGGGCCCAGTCAGCCTTTCTGCGAATGCATGGGATGTTGTCGATGGCGTT 94348 Query 120882 CAGCAG 120887 | ||| Sbjct 94349 GAACAG 94354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419929842560