Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq59 105 8e-18 >seq59 Length=213647 Score = 105 bits (116), Expect = 8e-18 Identities = 301/456 (66%), Gaps = 20/456 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||| ||| | | ||| |||||||| Sbjct 93825 TAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCATG 93884 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCA-AATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | ||| | || | ||| |||| || || || Sbjct 93885 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTG-CCAAGAGCGAGCAGCAGTCG 93943 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||||||||||| |||| || | |||||| |||| || ||| Sbjct 93944 GTCAGCGACGAACTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGCAGCGCACA 94003 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || | || || | ||| | | ||||||| | || || ||| | |||| || Sbjct 94004 AGGCAAGGCATCGGTCAAGAATTCTTGCTCAATGGCGACGGCCTCCACAATGATGCTTTG 94063 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGA----AGAGTTCCAC-GGCAAAC 130021 | | ||| | ||| | || |||||| |||| | || ||||| | Sbjct 94064 CAC---CACCGA-CTTGGT-----GGGCTTGTTCTTGAGGTGAGAGAACAACAGGCAAGC 94114 Query 130022 ----TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077 || ||| | |||||||| ||||||||||| || || |||||| || || | Sbjct 94115 GAAGTCAGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCAGC 94174 Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 130137 |||||| || ||||||||||||||||| || | |||||||| ||||||||||| || Sbjct 94175 CATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAATGAGCCGGAGAAGAAGATACC 94234 Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173 ||| ||| || || |||| || ||| ||| || Sbjct 94235 CTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAA 94270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434086816640