Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq59 113 5e-20 >seq59 Length=213647 Score = 113 bits (124), Expect = 5e-20 Identities = 342/513 (67%), Gaps = 18/513 (4%) Strand=Plus/Minus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC-- 59670 ||||||||| | | ||| |||||||| || | || || | || ||| |||||| Sbjct 94636 TCATTCTGGACTGCCGAAGAGATTGATCTGTCAAAGGATCTCCACGACTGGAACAAGCGA 94577 Query 59671 -TCAATTACGACGAGCAGCAT-TTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGA 59728 ||||| ||||||||| || | |||||| ||||| || |||||||| || || Sbjct 94576 CTCAATGACGACGAGC-GCTTCTTCATCTCACACGTCCTTGCATTCTTCGCCGCATCCGA 94518 Query 59729 TGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAG--GATGTCCAGATTGCCGAG 59786 || ||||| | || || | | | || | ||| | || || || || |||| Sbjct 94517 CGGCATTGTCAACGAGAACCTGGTC--GAGCGATTCAGCGCCGAGGTGCAAATACCCGAA 94460 Query 59787 GCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCG 59846 || || | ||||||| | ||| | | ||| |||||||||||||| ||||| Sbjct 94459 GCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACATACTCC 94400 Query 59847 CTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGG-CTGGTCTGTTCCGTGCCAT 59905 ||| | ||||| | | ||| || || ||| | | | |||||| ||||| Sbjct 94399 CTCCTCATCGACACATACATCAGCGAGCCT-AAGCAACGAACATACCTGTTCAACGCCAT 94341 Query 59906 AGAGA-CGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGA--GTCC 59962 || | | |||| ||| | | ||| || || |||||| ||| ||||| | | Sbjct 94340 CGACAACATCCCATGCATTCGCAGAAAG-GCTGACTGGGCCCTGCGATGGATCTCGGACA 94282 Query 59963 TGGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTC 60020 ||| | | || || || || || || ||||| ||| || || || ||||||||| Sbjct 94281 AGGACTCGACGTTCGCTATGCGACTGATTGCCTTTGC-TGCTGTCGAGGGTATCTTCTTC 94223 Query 60021 TCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080 || ||||| ||| | || |||||| | || ||||||||||||||| | ||||| | Sbjct 94222 TCCGGCTCATTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGCCTCACC 94163 Query 60081 TTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 |||||||||||||| || ||||| ||||||||| Sbjct 94162 TTCTCCAACGAGCTCATCTCCCGCGACGAGGGC 94130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523812655360