Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq132 100 2e-16 >seq132 Length=72508 Score = 100 bits (110), Expect = 2e-16 Identities = 206/298 (69%), Gaps = 10/298 (3%) Strand=Plus/Minus Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444 ||||||||||| ||| |||||| || || || | || |||||| ||| || | | Sbjct 51718 GGGTTCCAGGCAGACATGATGATTCGTCTATCATAAGGATTGTTCTTGAGTTTGTGGATG 51659 Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504 | | || |||||||| || ||| | |||||| |||| ||||||| Sbjct 51658 ACCTCAGCCAATTGATCCACTCCTTGCCCAGTATAGTCTGTATGGCAGTCCTTGTACTCG 51599 Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564 || || ||||| ||||||||||||||||| || || || ||||| || ||||| | ||| Sbjct 51598 GCACCAAAATGTCTCCATTGGAACCCGTAGACTGGCCCAAGGTCACCTTCTTCGCGGTG- 51540 Query 27565 TCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 27623 |||||| | |||| | | | |||||||| |||||| | |||||||| | || Sbjct 51539 AGAAAGCCCGACGCTGTCGAGATACTCTCTGGATCCGTTGCCATCCCAGATGTGCACATT 51480 Query 27624 CT--TCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTG--ACGAACCACAGCAGCTC 27677 || || | |||| ||||| | ||| || | | ||| ||||||||||||| ||| Sbjct 51479 CTGGTCCTGTAGAG-TCTTT-GCGTTGGT--ATCTGCTGCAACGAACCACAGCAACTC 51426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506551514864