Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq59 111 2e-19 >seq59 Length=213647 Score = 111 bits (122), Expect = 2e-19 Identities = 337/519 (65%), Gaps = 14/519 (3%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || ||||| || | ||| || ||||| || || | ||| || || | ||| Sbjct 94152 TCGTTGGAGAAGGTGAGGCCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCG 94211 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || || ||||| || || || || || ||||| || | |||| | || | Sbjct 94212 AATGAGCCGGAGAAGAAGATACCCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAAC 94271 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | || |||| ||||| || | ||||| |||||||| | | || || Sbjct 94272 GTCGAGTCCTTGTCCGAGATCCATCGCAGGGCCCAGTCAGCCTTTCTGCGAATGCATGGG 94331 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTA----TCTTTAACGTAAGT 48415 || | || || || || || || | | ||| ||||| || | | ||| || Sbjct 94332 ATGTTGTCGATGGCGTTGAACAGGTA----TGTTCGTTGCTTAGGCTCGCTGATGTATGT 94387 Query 48416 ATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTA 48475 || || | || || | |||||||| || || || || ||||| || ||||| Sbjct 94388 GTCGATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTA 94447 Query 48476 AAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATT 48535 || |||| ||||| | || || ||||| | | ||||| || ||| ||||| || Sbjct 94448 GAAGCATCGTGCTTCGGGTATTTGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTT 94507 Query 48536 TACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTT 48595 || || || || || || || ||||| | || ||| || || | |||| Sbjct 94508 GACAATGCCGTCGGATGCGGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTC 94567 Query 48596 GGAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGT 48652 | | | ||| || |||||||| | || ||| ||||| | ||| | ||||| || || Sbjct 94568 GTCATTGAGTCGCTTGTTCCAGTCGTGGAGATCCTTTGACAGATCAATCTCTTCGGCAGT 94627 Query 48653 CCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||| ||||||||||| || || || ||||| |||||||| Sbjct 94628 CCAGAATGATGCCTCGGCCTTCTTGTACATGTTCCATAT 94666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667549596160