Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq59 114 2e-20 >seq59 Length=213647 Score = 114 bits (126), Expect = 2e-20 Identities = 336/515 (65%), Gaps = 6/515 (1%) Strand=Plus/Plus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || || ||||| |||| ||| || |||||||| || | ||| || || | ||| Sbjct 94152 TCGTTGGAGAAGGTGAGGCCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCG 94211 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 || || || || ||||| || || || ||||| || || || | |||| | || | Sbjct 94212 AATGAGCCGGAGAAGAAGATACCCTCGACAGCAGCAAAGGCAATCAGTCGCATAGCGAAC 94271 Query 46792 CTGGCATCATTAT--GA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848 | | || || | || ||||| | | ||||| ||||||||| | | || || Sbjct 94272 GTCGAGTCCTTGTCCGAGATCCATCGCAGGGCCCAGTCAGCCTTTCTGCGAATGCATGGG 94331 Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908 || | || || || || || || | || || | | || | | ||||| || Sbjct 94332 ATGTTGTCGATGGCGTTGAACAGGTATGTTCGTTGCTTAGGCTCGCTGATGTATGTGTCG 94391 Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968 || | || || | || || || ||||| || || ||||| || ||||| || Sbjct 94392 ATGAGGAGGGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAG 94451 Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACT 47028 |||| |||||| | || || ||||| | | ||||| || || ||||| || || Sbjct 94452 CATCGTGCTTCGGGTATTTGCACCTCGGCGCTGAATCGCTCGACCAGGTTCTCGTTGACA 94511 Query 47029 ATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTA 47088 || || || || || || ||||| | || ||| || || | || ||| | Sbjct 94512 ATGCCGTCGGATGCGGCGAAGAATGCAAGGACGTGTGAGATGAAGAAGCGCTCGTCGTCA 94571 Query 47089 GTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAG 47145 | ||| || |||||||| | || ||| ||||| | ||| | ||||| || |||||| Sbjct 94572 TTGAGTCGCTTGTTCCAGTCGTGGAGATCCTTTGACAGATCAATCTCTTCGGCAGTCCAG 94631 Query 47146 AATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 ||||| ||||| || || || ||||| |||||||| Sbjct 94632 AATGATGCCTCGGCCTTCTTGTACATGTTCCATAT 94666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933116718080