Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 109 1e-18
>seq1383
Length=8527
Score = 109 bits (120), Expect = 1e-18
Identities = 563/876 (64%), Gaps = 33/876 (4%)
Strand=Plus/Plus
Query 229780 ATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTGGACCACTGAGGAAGTT--CCTC 229837
|| ||| | |||||||||||||| | ||| ||||||||||| | ||||| || ||||
Sbjct 6913 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGACCTC 6972
Query 229838 TGAACGCAGACGTCGTCGACTGGCGTGAGAAACTCAATGACGACGA-ACGTCATTTCATC 229896
| | | ||| || ||||||| | || |||| ||||| || | || | ||||||
Sbjct 6973 TCCAAG--GACCTCCACGACTGGAACAACAAGATCAACGACGATGAGAAGT-ACTTCATC 7029
Query 229897 AAACACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATCTGCA-GAC 229955
|||||||| | ||| ||||| | || || || || || | || || ||| ||
Sbjct 7030 TCTCACATCCTCGCTTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTGGTCGAG 7089
Query 229956 CAACTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCAAACATT 230015
| ||| || | || || ||| || ||||| || || || | | ||| | |
Sbjct 7090 CG-CTTCAGCGGCGAGGTCCAGGTCCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCAT 7148
Query 230016 CAACGAATCTATCCATTCTGAACAATATGCTCTGCTTATCGACGCGCTTATTTCCGACGA 230075
| || ||||| ||||| || | ||||| || ||| | || | | ||
Sbjct 7149 GATGGAGAACATCCACTCTGAGACCTACTCCCTGCTCATTGACACCTACAT---CAAGGA 7205
Query 230076 GCAAGAACGGA--ACG-AGCTTTTTGATGCCATTGAAAACATCCCGGCGGTTCATAACAA 230132
|| | | | ||| | || || ||||||| || | |||||| || | | || ||
Sbjct 7206 GCCTGCCCAGCGCACGCACCTGTTCAATGCCATCGACACCATCCCCGCCATCCGCAAGAA 7265
Query 230133 GGCAAAGTGGGCTCAGAAATGGCTAGA--ACCTGGTAAATCG---TTTGCCGAGCGTCTC 230187
||| | ||||| | | ||| | ||| | || ||| |||||| |||| ||
Sbjct 7266 GGCCGACTGGGCCCTGCGGTGGATCACTGACCAG--AAGTCGACCTTTGCCCAGCGCCTG 7323
Query 230188 GTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAGTTTCTGCG-CCATCTTTT 230245
||||| | | ||| || ||||| || | ||| | || | | ||| ||||||| |
Sbjct 7324 GTCGCGTTTGCTGCTGTCGAGGGTAT-CT-TCTTCAGCGGTGCCTTTGCCTCCATCTTCT 7381
Query 230246 GGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCG 230305
|||| ||| || | ||||| ||||| | || |||||| ||||| || |
Sbjct 7382 GGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGTG 7441
Query 230306 ACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTA 230364
||||||||||||| || | | |||| | || ||| || || || ||||| |
Sbjct 7442 ACGAGGGTCTCCA-CACCGACTTCGCCTGCCTGCTGTTCTC---GCACCTTAACAACCGC 7497
Query 230365 CCATTCGAGACGGTCA---AACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTC 230421
|| | || ||||| | | ||||| || || || | ||| ||||||||
Sbjct 7498 CCCAGCAAGCAGGTCATTGAGGACATCATCGTCGACGCCGTGCGCATCGAGCAGGAGTTC 7557
Query 230422 ATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTAC 230481
| || || | || || ||| | ||||||||| | | || ||| ||||||
Sbjct 7558 CTCACCGAGGCCCTGCCGTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTAC 7617
Query 230482 ATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCT 230541
|| || ||||| ||||||||| | | || || || || ||||||| |||||| ||
Sbjct 7618 ATTGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACGAGAAGGTGTACCGGTCG 7677
Query 230542 AAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAA 230601
| |||||||| | || |||||| ||| || || || |||||||||||||||||
Sbjct 7678 ACAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAG 7737
Query 230602 AAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||| ||| | || || |||| | | || || |||
Sbjct 7738 AAGCGCGTCGGCGAGTACCAGAAGGCCGGCGTCATG 7773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057742191858680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |