Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 114 1e-20
>seq1383
Length=8527
Score = 114 bits (126), Expect = 1e-20
Identities = 372/570 (65%), Gaps = 11/570 (2%)
Strand=Plus/Minus
Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014
|||| ||| || ||||| ||| || | |||||||| | ||| || ||||| ||
Sbjct 7478 AACAGCAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAG 7419
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
|| |||| |||||||| || || ||||| | ||| || || | ||| || | ||
Sbjct 7418 AAGGTCAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCG 7359
Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134
||||| ||||||||||| | |||||||||| | || | ||| | |||| |
Sbjct 7358 CTGAAGAAGATACCCTCGACAGCAGCAAACGCGACCAGGCGCTGGGCAAAGGTCGACTTC 7299
Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTC 17193
| || | ||||| | | |||| ||||| || |||| ||| || || ||
Sbjct 7298 TGGTCAGTGATCCACCGCAGGGCCCAGTCGGCCTTCTTGCGG-ATGGCGGGGATGGTGTC 7240
Query 17194 TATGGCCTTAAATAATTTCTCTTTTTCCTGT--AGG-TCGATTATATACGTATCGATGAG 17250
||||| || || | | | | ||| ||| || | || || || || |||||
Sbjct 7239 GATGGCATTGAACAGGTGCG---TGCGCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAG 7183
Query 17251 TAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCG 17310
||| ||| | || ||||| ||||||||||| ||||| || ||||| ||||| ||
Sbjct 7182 CAGGGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCG 7123
Query 17311 GGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCC 17370
|| |||| | || || || || ||| || || | || || ||||| ||||||||
Sbjct 7122 AGCCTCCGGGACCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCC 7063
Query 17371 GTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC--CGGTG-T 17427
||| ||||||||| || || | || || ||||| || || || || || || |
Sbjct 7062 GTCCGACGCGGCGAAGAAAGCGAGGATGTGAGAGATGAAGTACTTCTCATCGTCGTTGAT 7003
Query 17428 AAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACT 17487
| |||||| | | || ||||| | || | || |||| |||||| |||
Sbjct 7002 CTTGTTGTTCCAGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCCAGAAAGA 6943
Query 17488 AGCCACTGCCTTTTTATACATATTCCAAAT 17517
|||| | ||||| || ||||| | ||| ||
Sbjct 6942 AGCCTCGGCCTTCTTGTACATCTGCCAGAT 6913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517506551184480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |