Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq353 168 8e-37 >seq353 Length=20357 Score = 168 bits (186), Expect = 8e-37 Identities = 278/400 (70%), Gaps = 6/400 (2%) Strand=Plus/Minus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | |||||||||||| ||| ||||| ||||| ||| |||||| Sbjct 5749 ACGTAGAACTGGGCGAACATGTGGCAGGGCGGGAGGACCATGTTGGGCATGTCGGCCGGG 5690 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATC---TCCCCTATC 145986 ||||||||| |||| ||||| | | | |||||| || | | | | | || Sbjct 5689 TTCCAGGCGCTGAGCACGAGGCGGCGGTCGAAGGGGTTGGTCCGCAGCGTGTGCACGATG 5630 Query 145987 AGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCG 146046 | || |||||||| || ||||| || ||| || ||| | |||||||||| Sbjct 5629 CGCGCC---AGCTGGTCGACCCCCTGGCCGGAGTAGTCGGTCGCGCTGTCCACGTACTGC 5573 Query 146047 GCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC 146106 || |||||||||| ||||||||||||||| ||||| ||||||||||| | | | | Sbjct 5572 GCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGACCCAGGTCCCCCTCCGCGCGGGAG 5513 Query 146107 CCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCC 146166 ||| ||| | | | ||||| || || || |||||| ||||||||||||||||||| Sbjct 5512 GTCAGGCCGAGCTTGTCAAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCT 5453 Query 146167 CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGG 146226 | |||||| | || ||| || |||||||||||| ||||| ||| Sbjct 5452 TGTGAGGAGAGGGTGTGTGACGAGGTGTCGCCGGAGATGAACCAGAGGAGCTCGGCGATC 5393 Query 146227 ACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 || | | |||||| | |||||||| || ||||||| Sbjct 5392 ACGGCTTTGGTGAAGACGCGTTTGGTGGTGAGGAGGGGGA 5353 Score = 149 bits (164), Expect = 7e-31 Identities = 130/162 (80%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749 ||||||||||| ||||| ||||||||||| |||| ||||||| | | ||||||| | Sbjct 6007 TCCACGTGGTTCAGGTACACGTGCGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACC 5948 Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||| | | ||| || | ||||| |||||||| | ||||||||| |||||||| ||| Sbjct 5947 AGGTCGCACACGTGCGCCAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGC 5888 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || |||||||||||||| | |||||| ||||| ||||||||| Sbjct 5887 ACGCCCAGCCCCATGTCGCACGAGCGTTGGTAGAGCTGGCAG 5846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590032278705440