Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq353 168 8e-37
>seq353
Length=20357
Score = 168 bits (186), Expect = 8e-37
Identities = 278/400 (70%), Gaps = 6/400 (2%)
Strand=Plus/Minus
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929
|||||||||||| | | |||||||||||| ||| ||||| ||||| ||| ||||||
Sbjct 5749 ACGTAGAACTGGGCGAACATGTGGCAGGGCGGGAGGACCATGTTGGGCATGTCGGCCGGG 5690
Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATC---TCCCCTATC 145986
||||||||| |||| ||||| | | | |||||| || | | | | | ||
Sbjct 5689 TTCCAGGCGCTGAGCACGAGGCGGCGGTCGAAGGGGTTGGTCCGCAGCGTGTGCACGATG 5630
Query 145987 AGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCG 146046
| || |||||||| || ||||| || ||| || ||| | ||||||||||
Sbjct 5629 CGCGCC---AGCTGGTCGACCCCCTGGCCGGAGTAGTCGGTCGCGCTGTCCACGTACTGC 5573
Query 146047 GCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC 146106
|| |||||||||| ||||||||||||||| ||||| ||||||||||| | | | |
Sbjct 5572 GCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGACCCAGGTCCCCCTCCGCGCGGGAG 5513
Query 146107 CCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCC 146166
||| ||| | | | ||||| || || || |||||| |||||||||||||||||||
Sbjct 5512 GTCAGGCCGAGCTTGTCAAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCT 5453
Query 146167 CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGG 146226
| |||||| | || ||| || |||||||||||| ||||| |||
Sbjct 5452 TGTGAGGAGAGGGTGTGTGACGAGGTGTCGCCGGAGATGAACCAGAGGAGCTCGGCGATC 5393
Query 146227 ACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
|| | | |||||| | |||||||| || |||||||
Sbjct 5392 ACGGCTTTGGTGAAGACGCGTTTGGTGGTGAGGAGGGGGA 5353
Score = 149 bits (164), Expect = 7e-31
Identities = 130/162 (80%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749
||||||||||| ||||| ||||||||||| |||| ||||||| | | ||||||| |
Sbjct 6007 TCCACGTGGTTCAGGTACACGTGCGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACC 5948
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
||| | | ||| || | ||||| |||||||| | ||||||||| |||||||| |||
Sbjct 5947 AGGTCGCACACGTGCGCCAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGC 5888
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851
|| |||||||||||||| | |||||| ||||| |||||||||
Sbjct 5887 ACGCCCAGCCCCATGTCGCACGAGCGTTGGTAGAGCTGGCAG 5846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590032278705440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |