Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 378 7e-100
seq4893 131 2e-25
seq2403 129 6e-25
seq2035 120 3e-22
seq88 109 6e-19
>seq1383
Length=8527
Score = 378 bits (418), Expect = 7e-100
Identities = 531/737 (72%), Gaps = 15/737 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||||| ||||||| | |||||
Sbjct 6913 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGACCTC 6972
Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGA---ACGACAACGAGCGCCATTTCATCAAG 116752
||||||||| ||||||| | | || ||||| | ||| | ||||||
Sbjct 6973 TCCAAGGACCTCCACGACTGGAACAACAAGATCAACGACGATGAGAAGTACTTCATCTCT 7032
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||| | || || || |||||||| |||||||||||||||||||| |||||||||||
Sbjct 7033 CACATCCTCGCTTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCGC 7092
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| ||||| ||||| | ||||| || |||||||||||||| |||||| |||
Sbjct 7093 TTCAGCGGCGAGGTCCAGGTCCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGATG 7152
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTC 116928
|||||| | ||||| || | || || ||||| ||||| ||| | | || || |
Sbjct 7153 GAGAACATCCACTCTGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGC-CTGC 7211
Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988
|| | || || |||| || |||||||| || || || | || |||||||
Sbjct 7212 CCAGCGCACGCACC---TGTTCAATGCCATCGACACCATCCCCGCCATCCGCAAGAAGGC 7268
Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCG-CCTTCGGCGAGCGCCTGGTGG 117047
||| ||||| ||||| |||||| | | | ||| | || |||| | | |||||||||| |
Sbjct 7269 CGACTGGGCCCTGCGGTGGATCACTGACC-AGAAGTCGACCTTTGCCCAGCGCCTGGTCG 7327
Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107
| || || || |||||||| ||||||| || || ||| |||| || |||||||
Sbjct 7328 CGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCA 7387
Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
|||| ||||||||||||||||||||||| ||| ||||||||||||||| | |||||||
Sbjct 7388 AGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGG 7447
Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227
|||| || |||||| ||||| |||||||| ||| | | || || ||| |
Sbjct 7448 GTCTCCACACCGACTTCGCCTGCCTGCTGTTCTCGCACCTTAACAACCGCCCCAGCAAGC 7507
Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287
| | | ||| ||| || |||||| || |||||||||| ||||||||||| |
Sbjct 7508 AGGTCATTGAGGACATCATCGTCGACGCCGTGCGCATCGAGCAGGAGTTCCTCACCGAGG 7567
Query 117288 CGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346
| ||||| ||||| ||||| || | || | | | |||| ||| ||||| ||||||
Sbjct 7568 CCCTGCC-GTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTC 7626
Query 117347 GTCGCCGACAGGCTGCT 117363
||||||||| | |||||
Sbjct 7627 GTCGCCGACCGCCTGCT 7643
>seq4893
Length=312
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| |||||||| || || || ||||| || || || | || || || | |
Sbjct 88 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAGAGCTCA 147
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || || | ||||| |||||||| || |||||||
Sbjct 148 GACACGATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 206
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | ||||||||| ||| |||| |||| ||| || |||| |||||||||
Sbjct 207 GCAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGCGACTACAA 266
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| |||| ||||
Sbjct 267 CATCCAGAAGGAGAGCACGTTGCA 290
>seq2403
Length=4098
Score = 129 bits (142), Expect = 6e-25
Identities = 142/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750
|||| || ||||| || || |||||||| || ||||||||| |||| ||||| || | |
Sbjct 2357 TGCAGATCTTCGTGAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCGG 2298
Query 40751 ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810
||| | | | | ||||| || || | ||||| |||||||| ||| | |||||||
Sbjct 2297 ACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGC 2238
Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870
| || || |||| |||||||||||||| || || | ||||| ||| ||||||||||
Sbjct 2237 AGCGCCTGATCTTTGCGGGCAAACAGCTCGAGGATGGCCGCACTCTCTCTGACTACAACA 2178
Query 40871 TCCAGAAGG 40879
| |||||||
Sbjct 2177 TTCAGAAGG 2169
>seq2035
Length=5329
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||||||||| || |||||| | || || || | | |
Sbjct 1248 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 1189
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | ||||| || || | ||||| |||||||||||| | ||||||
Sbjct 1188 GACACAATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 1129
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || ||||| ||||| || || | | |||||| || |||||
Sbjct 1128 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCAGGACCCTCTCGGATTACAAT 1069
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920
|||||||||||| ||| || || || ||| | ||| || | || || |||
Sbjct 1068 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTCCGCCTGCGTGGTGGTGGC 1018
>seq88
Length=36327
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || |||||||| || || || || | || || ||| | |
Sbjct 33115 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATTACTCTGGAAGTGGAATCTTCG 33174
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| ||||| ||| |||| || || ||||| |||||| | |||||
Sbjct 33175 GATACGATCGACAACG-TCAAGTCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGACCA 33233
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| ||||||||| ||| |||| || | || || || |||||||||
Sbjct 33234 GCAGCGTTTGATCTTCGCGGGCAAGCAGTTGGAGGATGGTCGGACTCTGTCCGACTACAA 33293
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| || || || | ||| |||| | | ||||||
Sbjct 33294 CATCCAGAAGGAGAGTACTCTCCACTTGGTGCTGCGTCTCCGTGGCGGC 33342
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || || || || |||||| |||| || || | ||
Sbjct 32659 ATGCAAATCTTCGTCAAGACCCTGACCGGGAAGACTATCACCCTCGAGGTGGAGTCTTCC 32718
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | ||| || || | ||||| ||||| || || | |||||
Sbjct 32719 GACACCATCGACAACGTT-AAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCA 32777
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | ||||||||||| || || || | ||||| || || |||||
Sbjct 32778 GCAGCGCCTGATTTTTGCGGGCAAACAACTCGAGGATGGTCGCACTCTTTCGGATTACAA 32837
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||| ||| ||||| || || ||||| || | || ||
Sbjct 32838 TATCCAGAAGGAAAGCACTCTGCACCTTGTCCTGCGCCTGCGCGGTGG 32885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515180326711360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |