Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq4938 477 1e-130 >seq4938 Length=306 Score = 477 bits (528), Expect = 1e-130 Identities = 287/302 (95%), Gaps = 0/302 (0%) Strand=Plus/Plus Query 8060 TAAATaaaaaaaaGAATCTGACTCGGCTAGATTTAAAACGTGGAGCATTAGCCCTTGTAA 8119 |||||| |||||||||||||||||| ||||| |||||||||||||||||||| ||||||| Sbjct 1 TAAATAGAAAAAAGAATCTGACTCGACTAGACTTAAAACGTGGAGCATTAGCACTTGTAA 60 Query 8120 AAGGCTTGAATGTTCGAAATAAGAAAATCAATGCGGAAAGTGAAGCAAATTATATCAAAG 8179 ||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 61 AAGGCTTGAATGTACGAAATAAGAAAATCAATGCGGAAAGTGAAGCAGACTATATCAAAG 120 Query 8180 CGGTTTGGGATAATTTCCAGCTTTATGAAATGGCTTTGTCAGTCATTGGAATGCTTACGC 8239 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 121 CGGTTTGGGATAATTTCCAGCTTTATGAAATGGCTTTGTCAGTCATTGGGATGCTTACGC 180 Query 8240 CTAAAGAAGTCATTGAAACATTCCCAATTTACAAAAGATATGATGGTCATAAATACGAGA 8299 || ||||||||||||||| ||||||||||||||||||||||||||| | |||||| |||| Sbjct 181 CTCAAGAAGTCATTGAAATATTCCCAATTTACAAAAGATATGATGGCCGTAAATATGAGA 240 Query 8300 CAAAAGATTACTTTAGTGTACAAAAATCTTTAGCAGCGTATGACCTCAATCAGCCCATCA 8359 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 241 CAAAAGATTACTTTAGTGTACAAAAATCTTTAGCAGCTTATGACCTGAATCAGCCCATCA 300 Query 8360 AT 8361 || Sbjct 301 AT 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48451018306856