Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq2035 86.0 6e-12
>seq2035
Length=5329
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
|| || ||||| || |||||| ||||||| || ||||| || || || ||||| || |||
Sbjct 1094 TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTG 1153
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | ||||||| | | ||||||||||| ||| |
Sbjct 1154 TCCTGGATCTTGGACTTGACATTGTCGATTGTGTCGCTCGACTCCACCTCAAGGGTGATA 1213
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||||| || | || || ||||| || |||||
Sbjct 1214 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 1248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496026571971200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |