Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 242 5e-59
seq979 154 2e-32
>seq1383
Length=8527
Score = 242 bits (268), Expect = 5e-59
Identities = 583/866 (67%), Gaps = 37/866 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | ||| ||| | || ||
Sbjct 6913 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGACCTC 6972
Query 125079 TCCAAGGACCTGTACGATTGGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
||||||||||| |||| ||| | | | | | || || |||| | || || ||
Sbjct 6973 TCCAAGGACCTCCACGACTGGAACAACAAGATCAAC-GACGATGAGAAGTACTTCATCTC 7031
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
||||| | || ||||| |||| || || || ||||||||||| || ||| | ||
Sbjct 7032 TCACATCCTCGCTTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCG 7091
Query 125198 ATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254
||| ||| | ||| | || |||| ||| ||||| ||||| ||||| |||||
Sbjct 7092 CTTCAGCGGCGAGGT--CCAGGTCCCGGAGGC-TCGCTGCTTCTACGGCTTCCAGATCAT 7148
Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC 125314
||| |||||| | ||||| || | ||||| || ||||||| ||||| || ||
Sbjct 7149 GATGGAGAACATCCACTCTGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCC 7208
Query 125315 G---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371
|| || | ||| || || || || |||||||| | || | || || || ||
Sbjct 7209 TGCCCAGCGCACGCACCTGTTC---AATGCCATCGACACCATCCCCGCCATCCGCAAGAA 7265
Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431
||| | |||| | ||||||||| |||| | ||||| | | ||| | | |||||
Sbjct 7266 GGCCGACTGGGCCCTGCGGTGGATCACTGACCAGAAGTCGACCTTTGCCCAGCGCCTGGT 7325
Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491
|| || || || || ||||| |||||||| ||| ||||| ||||||| |||||
Sbjct 7326 CGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 7385
Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551
|||||||||||| ||||||||||| ||||| | |||||| | || || || |||||
Sbjct 7386 CAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGTGACGA 7445
Query 125552 GGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAAC-TATCTGCGTCCCGAG--T 125607
||| || ||| ||||| ||| || ||||| ||||| | || | | ||| ||
Sbjct 7446 GGGTCTCCACACCGACTTCGCCTGCCTGCTGTTCTCGCACCTTAACAACCGCCCCAGCAA 7505
Query 125608 GCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAG 125667
|||| || || ||| ||||| | | ||| |||||| | || || || |
Sbjct 7506 GCAGGTC-----AT--TGAGGACATCATCGT------CGACGCCGTGCGCATCGAGCAGG 7552
Query 125668 AGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCG 125727
|||| || ||||| |||| ||| | | || | |||||||||| ||| || |||
Sbjct 7553 AGTTCCTCACCGAGGCCCTGCCGTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGC 7612
Query 125728 AGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTT 125784
||||||| ||||| || || || || || || || | ||| || ||| | |
Sbjct 7613 AGTACATTGAGTTCGTCGCCGACCGCCTGCT---CGTCGCCCTCGGCAACGAGAAGGTGT 7669
Query 125785 ACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACT 125844
|| | | || ||||| || |||||| | ||| || || | || ||||||||||
Sbjct 7670 ACCGGTCGACAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACT 7729
Query 125845 TTTTCGAGAAGAAGGTCAGCGAGTAC 125870
| ||||||||| ||| ||||||||
Sbjct 7730 TCTTCGAGAAGCGCGTCGGCGAGTAC 7755
>seq979
Length=11123
Score = 154 bits (170), Expect = 2e-32
Identities = 336/499 (67%), Gaps = 8/499 (2%)
Strand=Plus/Plus
Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923
|| |||||| || || ||||| || || || || || | ||| ||||| | || |||
Sbjct 3865 CGCTACGTTGACCAAGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTACCTCGAGCCT 3924
Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983
|||||||| ||||| ||||| || |||| | || || ||| ||| || || |
Sbjct 3925 TGGCACGCCGACGTCTTTGAGTTCCTCGACCTCCGTAAGAACCACGGCAAGGAGGAAGTC 3984
Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC--- 97040
|| || | || | || || |||||| | || || | ||||||||||| |||
Sbjct 3985 CGTGCTCGCGATCTCTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAG 4044
Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100
|| |||| | | |||| || ||||||||| || || ||||| || ||||||||
Sbjct 4045 AAGAACGGAG---AGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCGATTGC 4101
Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-CGTGAG 97159
| || || ||||| |||||| ||| | |||||| | | ||||| ||| ||
Sbjct 4102 TATGGTGACGAGTTCGAGGCCCTGTATGAGAAGTACGAGAAGGCCGGCCGCGGTCGTAAG 4161
Query 97160 ACGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219
|| | || | || | | | || ||| | |||||| | ||||||| ||||| || |
Sbjct 4162 ACTA-TCAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAA 4220
Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279
|| | ||| |||||||||||| | || ||||| |||||||| || | |||||
Sbjct 4221 CCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTCGGCAC 4280
Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGC 97339
|||| ||||||| |||||||| || || | |||||| | | || |||||| ||
Sbjct 4281 CATCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTCGGCACCCGACGAGGTTGC 4340
Query 97340 AGTTTGCGTTCTGGCATCG 97358
|| ||| ||||| |||
Sbjct 4341 CGTCTGCAACCTGGCCTCG 4359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741003287083360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |