Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq4893 96.9 8e-15
seq88 96.9 8e-15
>seq4893
Length=312
Score = 96.9 bits (106), Expect = 8e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || ||||| ||||| | ||||| || | || || || || |||
Sbjct 278 TCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAA 219
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| |||| ||| || || ||||| || || || || ||||| ||||| | || || ||
Sbjct 218 ATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 159
Query 104489 TCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| | || || || | || ||||| || ||||| ||||| ||||||||||| |||||
Sbjct 158 TCGATCGTGTCTG-AGCTCTCCACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTAC 100
Query 104548 AAATATCTGCAT 104559
|| || |||||
Sbjct 99 GAAGATTTGCAT 88
>seq88
Length=36327
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || ||||| || ||||| | ||| || || | || || || || ||
Sbjct 33305 TCCTTCTGGATGTTGTAGTCGGACAGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAG 33246
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| | | ||| || || || || || || || |||||||||||||||| || || ||
Sbjct 33245 ATCAAACGCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGAATCTTTGACTTGACGTTG 33186
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | ||||| || ||| || || || ||||| ||||| || || || || || ||
Sbjct 33185 TCGATCGTATCCGAAGATTCCACTTCCAGAGTAATCGTCTTCCCCGTGAGGGTCTTGACG 33126
Query 104549 AATATCTGCAT 104559
|| ||||||||
Sbjct 33125 AAGATCTGCAT 33115
Score = 93.3 bits (102), Expect = 1e-13
Identities = 134/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || || || || ||||||||||| || | ||| | ||| ||
Sbjct 32643 AAGGACGAGGTGGAGGGTCGACTCCTTTTGGATATTATAGTCGGACAAAGTCCGACCATC 32584
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| | || || || |||||||| || | ||| || || || || || || || || ||
Sbjct 32583 TTCCAACTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 32524
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| | || ||||| || | |||||| | || ||||| || || || ||
Sbjct 32523 CTGAATCTTCGACTTAACATTGTCGATGGTATCAGAGGACTCCACCTCAAGGGTGATGGT 32464
Query 104527 CTTACCAGT 104535
||| || ||
Sbjct 32463 CTTGCCGGT 32455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151309355165488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |