Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq113 158 1e-33
>seq113
Length=33764
Score = 158 bits (174), Expect = 1e-33
Identities = 185/250 (74%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 5504 CCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTCC 5563
|||||| |||||| ||||| ||||| | | | || ||||| | |||||| ||
Sbjct 33346 CCCGTGCTCCCGAACCCGCCCGCGCCCCGCACGCTCTCCTCCAGCTCCTGCACCTCGACC 33287
Query 5564 ACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACC 5623
|| ||||| | ||||||| || |||||||| | ||||||||| || |||
Sbjct 33286 ACGTCGGGCGTGTAAATGCGCTCGATAATGAGCTGCGCGACCCGGTCGCCCTCCTGCACC 33227
Query 5624 TCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCG 5683
||| | ||| || | || ||||||||||| ||| ||| ||||||||||||||||
Sbjct 33226 TCGTAGTCGGCGTCGGCGTGGTTGAACAGCAGCACTTTGACGGGGCCGCGGTAGTCGGCG 33167
Query 5684 TCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCC 5743
|| || || ||||||||| |||||||||||||||| | || |||||||||||||| ||
Sbjct 33166 TCGATGACTCCCGCGCCCGTGTCGATGAAGTGCTTGGCTGCGAGGCCGGAGCGGGGGGCG 33107
Query 5744 ACGCGGCCGT 5753
| ||||||||
Sbjct 33106 ATGCGGCCGT 33097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430022763585632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |