Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq353 89.7 3e-13
>seq353
Length=20357
Score = 89.7 bits (98), Expect = 3e-13
Identities = 143/204 (70%), Gaps = 1/204 (0%)
Strand=Plus/Minus
Query 25389 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAG 25448
|| || || || ||||| | || ||||| |||| |||| || ||||| | ||||||
Sbjct 6049 GGGAATGGCCTCGGCTCGCGCTGCAGCTGCGTCTCGAGCGCGTCCACGTGGTTCAGGTAC 5990
Query 25449 ACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCC 25508
||||| ||||| |||| |||| | | || || | || || |||| |||
Sbjct 5989 ACGTGCGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACCAGGTCGCACACGTGCGCC 5930
Query 25509 ATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCC 25568
| ||||| ||| || || ||||||||||||||| || || || || | |||||||| |
Sbjct 5929 AGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGCCCCATGT-C 5871
Query 25569 CCCCGACCTCTGGTAGAGCTGACA 25592
| ||| | ||||||||||| ||
Sbjct 5870 GCACGAGCGTTGGTAGAGCTGGCA 5847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340112578202628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |