Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq4893 89.7 5e-13
seq88 89.7 5e-13
>seq4893
Length=312
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 94789 CAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTT 94848
|| || || |||||||||||| || ||||| || | ||| || ||||| | |||
Sbjct 306 CAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCG 247
Query 94849 GGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTC 94908
||||||| ||| || || | || || | | ||||| || |||||||| || ||
Sbjct 246 CCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTC 187
Query 94909 TTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGT 94968
||||| | || || | ||||||| | ||| ||||| | | || || || | |||
Sbjct 186 CTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAGCGT 127
Query 94969 GATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || |||||||| || || || ||||| |||||
Sbjct 126 AATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 88
>seq88
Length=36327
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| ||||||||| | |||| ||||| || | ||| || ||| || ||| |
Sbjct 33329 CGCAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGACAGAGTCCGACCA 33270
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||| ||| || || | ||||| || | ||||| ||||| || ||||| || ||
Sbjct 33269 TCCTCCAACTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGGGGGATACCCTCCTTA 33210
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| |||| ||||||| | ||| || || | || || || | || ||
Sbjct 33209 TCCTGAATCTTTGACTTGACGTTGTCGATCGTATCCGAAGATTCCACTTCCAGAGTAATC 33150
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || || || || || || || |||||||||||||
Sbjct 33149 GTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATGC 33113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448257376428960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |