Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq5331 145 1e-30
seq78 113 7e-21
seq688 109 9e-20
>seq5331
Length=262
Score = 145 bits (160), Expect = 1e-30
Identities = 179/245 (73%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519
|| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||||| || |||
Sbjct 11 GACAACATCCAAGGTATCACCAAGCCTGCCATCCGACGTCTCGCTCGCCGTGGCGGTGTC 70
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|||||| |||| | || |||| ||||||| || | ||| | ||| |||||| |
Sbjct 71 AAGCGTATCTCGGCCATGATCTACGAAGAGACCCGCGGTGTCCTCAAGTCTTTCCTCGAA 130
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
|||| || | ||| || || ||| ||||||||||| || | ||||||||||| ||
Sbjct 131 TCCGTCATTCGTGACGCCGTCACCTACACCGAGCACGCAAAGAGAAAGACTGTCACTTCG 190
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| ||| | || ||||| | || || |||||| | | | || ||||| || ||||
Sbjct 191 CTTGATGTTGTGTATGCCCTCAAGCGACAAGGCAGAACCCTCTACGGTTTCGGTGGTTAG 250
Query 16700 TCTTC 16704
||||
Sbjct 251 ACTTC 255
>seq78
Length=38615
Score = 113 bits (124), Expect = 7e-21
Identities = 86/99 (87%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 3285 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 3343
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||| |||||||| ||||||||||| ||||||||| ||||
Sbjct 3344 CCGCCGTCTGGCGCGTCGTGGTGGTGTCAAGCGTATCTC 3382
>seq688
Length=14371
Score = 109 bits (120), Expect = 9e-20
Identities = 87/102 (85%), Gaps = 2/102 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||
Sbjct 13196 CGCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCTA 13254
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||| |||||||| |||||||| || ||||||||| ||||||
Sbjct 13255 TCCGCCGTCTGGCGCGTCGTGGCGGTGTCAAGCGTATCTCTG 13296
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| |||| | ||| ||||||| || || |||| ||| |
Sbjct 13362 TGATCTACGAGGAGACCCGTGGTGTTCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGACG 13421
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| |||||||| | || |||||||||
Sbjct 13422 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTCGTCTATG 13481
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || || ||||| | | || ||||| || |||||
Sbjct 13482 CCCTCAAGCGCCAGGGCCGCACCCTGTACGGTTTCGGTGGTTAA 13525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79069681242948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |