Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq979 86.0 6e-12 >seq979 Length=11123 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 148250 CTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACA 148309 |||||| || || || ||| ||||||| || | |||||||||||| | ||||| || Sbjct 4140 CTCGTACTTCTCATACAGGGCCTCGAACTCGTCACCATAGCAATCGGCAAGGCCGGGGCA 4081 Query 148310 CTCGTCGGGGCACATCAATGACCATT-TCCCTCCTGTCTTTACCCTCTTCATAAACAGAT 148368 ||||| ||||||||||| | ||| | ||| | || ||| || | |||||| || || | Sbjct 4080 CTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCT-TCTCGACACGCTTCATGAAGAGGT 4022 Query 148369 CAGGTGTCCACATGGCAAAAAGAAGATCGCGAGC 148402 | || |||| | ||| | | ||||||||||| Sbjct 4021 CGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGC 3988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478626284921920