Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq979 453 3e-122 >seq979 Length=11123 Score = 453 bits (502), Expect = 3e-122 Identities = 1158/1744 (66%), Gaps = 30/1744 (2%) Strand=Plus/Plus Query 363431 TCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCC 363490 |||| || | ||||| || ||||| ||||| ||| | ||||||||||| | || ||| Sbjct 3491 TCAACGGCAAGATTGTCGAGCGCCCACAGCACATGATCATGCGTGTTGCCGTCGGCATCT 3550 Query 363491 ATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTA 363546 | | || || || || || ||||| || || || || | || | Sbjct 3551 GGGGAGACAACGTGGAGCGCGTCATCGAGACATACAACCTCATGTCCAA---CAAGT-TC 3606 Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || ||| | || || | | ||| || || || | | | | ||| | || ||| Sbjct 3607 TTCACACATGCCTCCCCCACCCTCTTCAACGCCGGTACCCCTCAGGCCCAGCTTTCCTCT 3666 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || ||||||||| |||| |||| ||||||| | Sbjct 3667 TGCTTCCTGGTCGACATGAAGGATGACAGCATCGAGGGCATCTACGACAGTCTTAAGACT 3726 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 || || | |||||||||| |||||||| || || | |||||| | ||||| Sbjct 3727 TGCGCCATGATTTCCAAGATGGCAGGCGGCATCGGCCTCAACATCCACCGCATCCGTGCG 3786 Query 363726 ACAGAA-CAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | | || ||||| |||||| || || ||||| | | |||||||| | Sbjct 3787 ACTGGATCA--TACATCGCCGGCACCAACGGCACTTCCAATGGCATCATCCCCATGCTCC 3844 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 |||| || |||| || || | ||||| ||||| ||||| ||||| || || | Sbjct 3845 GTGTCTTCAACAACACCGCCCGCTACGTTGACCAAGGTGGCAACAAGCGTCCCGGTGCCT 3904 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 |||| || || ||||||||| || ||||| | |||||||| || || ||||| || | Sbjct 3905 TTGCCATCTACCTCGAGCCTTGGCACGCCGACGTCTTTGAGTTCCTCGACCTCCGTAAGA 3964 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || |||||| | ||||| || ||||| ||| || || ||| || | |||| Sbjct 3965 ACCACGGCAAGGAGGAAGTCCGTGCTCGCGATCTCTTCCTGGCCCTCTGGATTCCCGACC 4024 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGT 364023 || |||||||| || ||| || || | ||| | || | ||||| |||| || Sbjct 4025 TCTTCATGAAGCGTGTCGAGA-AGAACGGAGAGTGGACTCTGATGTGCCCCAACGAGTGC 4083 Query 364024 CCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCG 364083 || || ||| ||||| | |||||||| | | || || || || ||||| || | Sbjct 4084 CCCGGCCTTGCCGATTGCTATGGTGACGAGTTCGAGGCCCTGTATGAGAAGTACGAGAAG 4143 Query 364084 GAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCG 364143 | || | ||||||||| || || || ||||| |||| ||||||| | || | Sbjct 4144 GCCGGCCGCGGTCGTAAGACTATCAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCT 4203 Query 364144 CAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAAC 364203 |||| ||||| || | |||| ||| | ||||| ||| |||||||||||| |||| Sbjct 4204 CAGACCGAGACCGGCAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAAC 4263 Query 364204 CAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACAC 364262 ||| || |||| || || | || |||| |||||| || || ||||| || || ||| | Sbjct 4264 CAGAAGAACCTCGGCACCA-TCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTC 4322 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--- 364319 || ||||||||| |||||| || ||||| || ||| | || ||||| ||| || Sbjct 4323 GGCACCCGACGAGGTTGCCGTCTGCAACCTGGCCTCGCTGGCCCTTCCTCAGTTCGTCGA 4382 Query 364320 ---AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACT 364374 || | ||| | |||| |||| | || | || || || | || || | | Sbjct 4383 CTACAACAAGGGTGTCTATGACTTCCAGAAGCTGCACGAAGTCGCCCAAGTCGTGGT--T 4440 Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCT 364434 |||| || ||||| | |||||| || | || || | | || || | Sbjct 4441 CGCAACCTGAACAAGATCATCGACGTCAACCACTACCCGGTCCAGGAGGCTTACAACAGC 4500 Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494 || ||||| || ||||| || || | ||||| |||||||| || || | ||| || | Sbjct 4501 AACATGCGCCACCGCCCCATCGGCGTCGGTGTCCAGGGCCTGGCCGATGCTTTCCTGGCG 4560 Query 364495 CTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACA 364554 || ||| | || || || || || ||||||| || |||||| | ||||| || || Sbjct 4561 CTTCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTGAATAAGCAAATCTTCGAGACC 4620 Query 364555 ATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGG-CAAAAACCAAGGGAAAGTACTC 364613 || ||| || || |||| || ||||| ||| ||| ||| | ||||| | | ||||| Sbjct 4621 ATCTATCACGCGGCTCTGACCGCCTCGTGCGATCTGGCCAAGGAGCAAGGCACA-TACTC 4679 Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673 || ||||| || ||||| | || ||||| | |||||| || | ||||| ||||| Sbjct 4680 GACCTATGAAGGATCCCCGGTATCCCAGGGTATCCTCCAGTACGACATGTGGAACGTCAC 4739 Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCG 364733 ||| | | || ||| ||||||| |||| |||| | ||| |||||||| || Sbjct 4740 GCCGACCGGCCTCTGGGACTGGGACGCGCTCAAGGCCAAGATCAAGGAGCATGGTGTCCG 4799 Query 364734 CAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAA 364793 ||| | | | ||||||||||| || || || || | || ||||| || ||||| Sbjct 4800 GAACAGCTTGCTCCTCGCGCCCATGCCGACCGCCTCGACGTCGCAAATCCTGGGCAACAA 4859 Query 364794 CGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATT 364853 ||| |||||||| || | || ||| | || || || || | | || || || Sbjct 4860 CGAATGCTTCGAGCCCTACACGTCCAACATCTACCAGCGTCGTGTCTTGGCTGGTGAGTT 4919 Query 364854 TCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAG 364913 | ||| || || | || | ||||| ||| |||| || || ||| |||| Sbjct 4920 CCAGGTTGTCAACCCCTGGCTCTTGAAGGACCTTGTCGACATGGGTCTCTGGTCCGACAA 4979 Query 364914 CATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA 364973 |||||||||| |||||||||| | |||||| | ||||||| ||| | ||| || Sbjct 4980 CATGAAGAACCGCATCATCGCCGATGGTGGTTCGATCCAGAACA-TCCCTAACATCCCGA 5038 Query 364974 -AGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATA 365032 ||| | ||| || | ||||| ||||| |||||||| || ||| || || || | | Sbjct 5039 CCGATATCAAGGCTCTCTACAAGACCGTTTGGGAAATCTCTCAGCGCACCGTCGTTCAGA 5098 Query 365033 TGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC 365092 |||| |||||||| || ||||| ||| |||| ||||||| | ||| | |||| Sbjct 5099 TGGCTGCCGATCGTGGCGCTTTCATCGATCAGTCCCAGTCGCTCAACATTCACATGCGCG 5158 Query 365093 AGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGA 365152 |||| | | | |||| | || |||||| ||| ||| ||||| ||||| |||| Sbjct 5159 AGCCGAGCATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTTGGTCTCAAGA 5218 Query 365153 CAGG 365156 | || Sbjct 5219 CGGG 5222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303252803520152