Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq979 194 2e-44 seq1383 127 2e-24 seq88 102 8e-17 seq4893 100 3e-16 seq2403 98.7 9e-16 seq2035 95.1 1e-14 >seq979 Length=11123 Score = 194 bits (214), Expect = 2e-44 Identities = 834/1296 (64%), Gaps = 33/1296 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||| || ||||| ||||||||| || | ||| |||||| |||| Sbjct 4931 TTGACAACCTGGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACGTGTAGGGC 4872 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | ||||| |||||||||||||| | |||| ||||| |||||| ||| | Sbjct 4871 TCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGGGCGCGAGG 4812 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || || || | || |||| |||||| | |||| |||| |||| ||||| Sbjct 4811 AGCAAGCTGTTCCGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCCAGTCCCAG 4752 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296 || |||||| | |||| ||||||||||||||| | || |||| | | ||||| | Sbjct 4751 AGGCCGGTCGGCGTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGATACCGGGGAT 4692 Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGC 145356 |||| | ||| ||| |||| ||||| || ||||| || |||||| Sbjct 4691 -CCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGGTCAGAGC 4633 Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416 || ||| || |||||| |||||| | || ||| || || |||| | Sbjct 4632 CGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAGACTCGAA 4573 Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476 |||||||| ||| | ||||||||||| || ||||| | || ||||||||||| || Sbjct 4572 AGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGATGGGGCG 4513 Query 145477 ATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTT 145536 || ||||||||| | ||| || || || || | || |||||| || || Sbjct 4512 GTGGCGCATGTTGCTGTTGTAAGCCTCCTGGACCGGGTAGTGGTTGACGTCGATGATCTT 4453 Query 145537 ATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGC 145596 |||| ||| || || || || | | | | ||| ||| | |||||| | | | Sbjct 4452 GTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTGGAAGTCATAGACACC 4393 Query 145597 CTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTC 145656 || || | | || | | | ||| | ||| |||| || || || || ||| Sbjct 4392 CTTGTTGTAGTCGACGAACTGAGGAAGGGCCAGCGAGGCCAGGTTGCAGACGGCAACCTC 4333 Query 145657 CTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAG 145716 |||| | ||| | | |||||| | ||||| ||| | |||||| || || Sbjct 4332 GTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTGCCGAG 4273 Query 145717 ATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGT 145776 || | ||| || || || | |||||| ||||||||||||||| | || ||| || Sbjct 4272 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGT 4213 Query 145777 CTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTG 145833 ||| ||| | ||| | ||| | | | | || | || || | || | Sbjct 4212 CTCGGTCTGAGCCTCGAGGATGGCATACCAGAGC---TTTTGGGCCTTGATAGTCTTACG 4156 Query 145834 GTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATC 145893 |||||| | | ||||| ||| || || |||| ||| || ||| |||||||| Sbjct 4155 ACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACTCGTCACCATAGCAATC 4096 Query 145894 GGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCG 145953 || |||||||| |||| |||||| |||||||| | ||| | ||||| | ||| || Sbjct 4095 GGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGACACG 4036 Query 145954 CTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAG---TCGCGCGCTTTGCAATC 146010 || ||| || | || || | ||| || || || ||| ||||| || | || Sbjct 4035 CTTCATGAAGAGGTCGGGAATCCAGAGGGC---CAGGAAGAGATCGCGAGCACGGACTTC 3979 Query 146011 CTCAGCACCCATGTTTCGCTTC--AAATTAAGCACACT-ATAGATGTCCGCGTGCCACGG 146067 ||| || || ||| | | | | || | ||| | ||| ||| |||||||| || Sbjct 3978 CTC-CTTGCCGTGGTTC-TTACGGAGGTCGAGGA-ACTCAAAGACGTCGGCGTGCCAAGG 3922 Query 146068 TTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTAC 146124 || | |||| ||| | ||| || || |||||||| ||||| |||| || | Sbjct 3921 CTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGGC 3862 Query 146125 CATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTT 146184 ||||||| ||||| || | |||||| || ||| ||| |||||| || | Sbjct 3861 GGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGGC 3802 Query 146185 TAT-TCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCCGTAC 146242 || | || | | | | | || | || || | || | ||||| ||||| ||| | | Sbjct 3801 GATGTATGATCCAGTCGCA-CGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCAT-C 3744 Query 146243 TTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTT 146299 ||||| || ||||| |||| || | ||||||||||| || ||||| || ||| Sbjct 3743 TTGGAAATCATGGCGCAAGTC-TTAAGACTGTCGTAGATGCCCTCGATGCTGTCATCCTT 3685 Query 146300 CGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCC 146335 | ||| ||| ||| ||||| ||| | | ||| ||| Sbjct 3684 C--ATGTCGACCAGGAAGCAAGAGGAAAGCTGGGCC 3651 >seq1383 Length=8527 Score = 127 bits (140), Expect = 2e-24 Identities = 340/507 (67%), Gaps = 17/507 (3%) Strand=Plus/Plus Query 46096 CGCAAGAAAACCGACTGGGCGATGAAGTGGATCAAC-AGCAGCACCGCGACTTTCGCCGA 46154 |||||||| |||||||||| || |||||||| | ||| | |||| || ||| | Sbjct 7258 CGCAAGAAGGCCGACTGGGCCCTGCGGTGGATCACTGACCAGAAGT-CGACCTTTGCCCA 7316 Query 46155 GCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCAT 46214 ||| |||| || ||||| ||| ||||| |||| || || |||||| |||| Sbjct 7317 GCGCCTGGTCGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCAT 7376 Query 46215 CTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATC 46274 ||| | |||| | ||| |||||||||||||||| || ||||||||| || || Sbjct 7377 CTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTC 7436 Query 46275 GCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGA 46334 ||| |||||||| || || || ||||| || || || || | ||||| | | Sbjct 7437 GCGTGACGAGGGTCTCCACACCGACTTCGCCTG--CCTGCTGT---TCTCGC-ACCTTAA 7490 Query 46335 CAAGCTTGCGCCCGACACC--GT-GCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAG 46389 ||| | || || | | | || |||| ||| || || || ||| ||| ||| Sbjct 7491 CAACC--GCCCCAGCAAGCAGGTCATTGAGGACATCATCGTCGACGCCGTGCGCATCGAG 7548 Query 46390 AAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATG 46449 ||||||| | || | || ||||| |||||||| ||||||||| | | ||| Sbjct 7549 CAGGAGTTCCTCACCGAGGCCCTGCCGTGCGCCCTGCTCGGCATGAACTCCAACCTGATG 7608 Query 46450 TGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGC-CGAAGCA 46508 | ||||| ||||| || || ||||| |||||||| | | || || | |||| Sbjct 7609 AAGCAGTACATTGAGTTCGTCGCCGACCGCCTGCTCGT-CGCCCTCGGCAACGAGAAGGT 7667 Query 46509 TTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAA 46568 | | || || || || || || ||| | |||||||| || | ||||| || || Sbjct 7668 GTACCGGTCGACAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAA 7727 Query 46569 TTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || ||||| ||||||||||||||||| Sbjct 7728 CTTCTTCGAGAAGCGCGTCGGCGAGTA 7754 >seq88 Length=36327 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||||||| || || | || |||||| || |||||||| ||| Sbjct 33342 GCCGCCACGGAGACGCAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGA 33283 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||||| | ||||||||| ||| |||| |||||||||||||| || || Sbjct 33282 CAGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGGGG 33223 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||| || || || || ||| | | || ||||| | || | ||||| | || || | Sbjct 33222 GATACCCTCCTTATC-CTGAATCTTTGACTTGACGTTGTCGATCGTATCCGAAGATTCCA 33164 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | |||| || || || || || || || ||||| ||||||||| Sbjct 33163 CTTCCAGAGTAATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATG 33114 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | || || || || || | ||| |||||| ||||||||||| ||| Sbjct 33114 GCCACCGCGGAGCCGGAGGACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 33055 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||||| || |||||||| || | || | ||||||||||| ||||| Sbjct 33054 CAAAGTCCGACCATCCTCGAGTTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGG 32995 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || ||| ||| ||| | | || | || || | ||||| | Sbjct 32994 GATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCAATCGTGTCTGACGACTCAAC 32935 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || |||||||||||||| Sbjct 32934 CTCCAATGTGATGGTCTTTCCCGTCAGGGTCTTCACGAAAATCTGCAT 32887 >seq4893 Length=312 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 |||||| || || | || |||||| || |||||||| ||||| | || ||| ||| Sbjct 300 CAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTC 241 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| | ||||||||| ||| | || | ||||||||||||||||| || || || ||||| Sbjct 240 CTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 181 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| ||| ||||| | || | || || | | ||| | || | |||| || Sbjct 180 CTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTAATCGT 121 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || || |||||||| || ||||| Sbjct 120 CTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 88 >seq2403 Length=4098 Score = 98.7 bits (108), Expect = 9e-16 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| || | ||||| ||||| ||||| ||||| || ||| Sbjct 2169 CCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCGAGCTGTTTGCCCGCAAAGA 2228 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||| || || || || || ||||| ||| ||| ||||| | | Sbjct 2229 TCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 2288 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| ||||| || || || || |||| Sbjct 2289 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGA 2348 Query 131225 AAATCTGCA 131233 | ||||||| Sbjct 2349 AGATCTGCA 2357 >seq2035 Length=5329 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||| |||||| || || |||||||| Sbjct 1022 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAG 1081 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | || | ||||| ||||||||||| || |||| | ||||||||||| || || Sbjct 1082 AGGGTCCTGCCA-TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGG 1140 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 1141 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATTGTGTCGCTCGACTCCAC 1200 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || || || || || || || ||||| ||||||||| Sbjct 1201 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 1249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471977186634240