Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq979 194 2e-44
seq1383 127 2e-24
seq88 102 8e-17
seq4893 100 3e-16
seq2403 98.7 9e-16
seq2035 95.1 1e-14
>seq979
Length=11123
Score = 194 bits (214), Expect = 2e-44
Identities = 834/1296 (64%), Gaps = 33/1296 (3%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||| ||||| || ||||| ||||||||| || | ||| |||||| ||||
Sbjct 4931 TTGACAACCTGGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACGTGTAGGGC 4872
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || | ||||| |||||||||||||| | |||| ||||| |||||| ||| |
Sbjct 4871 TCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGGGCGCGAGG 4812
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || || || | || |||| |||||| | |||| |||| |||| |||||
Sbjct 4811 AGCAAGCTGTTCCGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCCAGTCCCAG 4752
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296
|| |||||| | |||| ||||||||||||||| | || |||| | | ||||| |
Sbjct 4751 AGGCCGGTCGGCGTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGATACCGGGGAT 4692
Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGC 145356
|||| | ||| ||| |||| ||||| || ||||| || ||||||
Sbjct 4691 -CCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGGTCAGAGC 4633
Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416
|| ||| || |||||| |||||| | || ||| || || |||| |
Sbjct 4632 CGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAGACTCGAA 4573
Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476
|||||||| ||| | ||||||||||| || ||||| | || ||||||||||| ||
Sbjct 4572 AGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGATGGGGCG 4513
Query 145477 ATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTT 145536
|| ||||||||| | ||| || || || || | || |||||| || ||
Sbjct 4512 GTGGCGCATGTTGCTGTTGTAAGCCTCCTGGACCGGGTAGTGGTTGACGTCGATGATCTT 4453
Query 145537 ATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGC 145596
|||| ||| || || || || | | | | ||| ||| | |||||| | | |
Sbjct 4452 GTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTGGAAGTCATAGACACC 4393
Query 145597 CTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTC 145656
|| || | | || | | | ||| | ||| |||| || || || || |||
Sbjct 4392 CTTGTTGTAGTCGACGAACTGAGGAAGGGCCAGCGAGGCCAGGTTGCAGACGGCAACCTC 4333
Query 145657 CTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAG 145716
|||| | ||| | | |||||| | ||||| ||| | |||||| || ||
Sbjct 4332 GTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGGTGCCGAG 4273
Query 145717 ATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGT 145776
|| | ||| || || || | |||||| ||||||||||||||| | || ||| ||
Sbjct 4272 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGT 4213
Query 145777 CTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTG 145833
||| ||| | ||| | ||| | | | | || | || || | || |
Sbjct 4212 CTCGGTCTGAGCCTCGAGGATGGCATACCAGAGC---TTTTGGGCCTTGATAGTCTTACG 4156
Query 145834 GTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATC 145893
|||||| | | ||||| ||| || || |||| ||| || ||| ||||||||
Sbjct 4155 ACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACTCGTCACCATAGCAATC 4096
Query 145894 GGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCG 145953
|| |||||||| |||| |||||| |||||||| | ||| | ||||| | ||| ||
Sbjct 4095 GGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCTCGACACG 4036
Query 145954 CTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAG---TCGCGCGCTTTGCAATC 146010
|| ||| || | || || | ||| || || || ||| ||||| || | ||
Sbjct 4035 CTTCATGAAGAGGTCGGGAATCCAGAGGGC---CAGGAAGAGATCGCGAGCACGGACTTC 3979
Query 146011 CTCAGCACCCATGTTTCGCTTC--AAATTAAGCACACT-ATAGATGTCCGCGTGCCACGG 146067
||| || || ||| | | | | || | ||| | ||| ||| |||||||| ||
Sbjct 3978 CTC-CTTGCCGTGGTTC-TTACGGAGGTCGAGGA-ACTCAAAGACGTCGGCGTGCCAAGG 3922
Query 146068 TTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTAC 146124
|| | |||| ||| | ||| || || |||||||| ||||| |||| || |
Sbjct 3921 CTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGGC 3862
Query 146125 CATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTT 146184
||||||| ||||| || | |||||| || ||| ||| |||||| || |
Sbjct 3861 GGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGGC 3802
Query 146185 TAT-TCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCCGTAC 146242
|| | || | | | | | || | || || | || | ||||| ||||| ||| | |
Sbjct 3801 GATGTATGATCCAGTCGCA-CGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCAT-C 3744
Query 146243 TTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTT 146299
||||| || ||||| |||| || | ||||||||||| || ||||| || |||
Sbjct 3743 TTGGAAATCATGGCGCAAGTC-TTAAGACTGTCGTAGATGCCCTCGATGCTGTCATCCTT 3685
Query 146300 CGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCC 146335
| ||| ||| ||| ||||| ||| | | ||| |||
Sbjct 3684 C--ATGTCGACCAGGAAGCAAGAGGAAAGCTGGGCC 3651
>seq1383
Length=8527
Score = 127 bits (140), Expect = 2e-24
Identities = 340/507 (67%), Gaps = 17/507 (3%)
Strand=Plus/Plus
Query 46096 CGCAAGAAAACCGACTGGGCGATGAAGTGGATCAAC-AGCAGCACCGCGACTTTCGCCGA 46154
|||||||| |||||||||| || |||||||| | ||| | |||| || ||| |
Sbjct 7258 CGCAAGAAGGCCGACTGGGCCCTGCGGTGGATCACTGACCAGAAGT-CGACCTTTGCCCA 7316
Query 46155 GCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCAT 46214
||| |||| || ||||| ||| ||||| |||| || || |||||| ||||
Sbjct 7317 GCGCCTGGTCGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCAT 7376
Query 46215 CTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATC 46274
||| | |||| | ||| |||||||||||||||| || ||||||||| || ||
Sbjct 7377 CTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTC 7436
Query 46275 GCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGA 46334
||| |||||||| || || || ||||| || || || || | ||||| | |
Sbjct 7437 GCGTGACGAGGGTCTCCACACCGACTTCGCCTG--CCTGCTGT---TCTCGC-ACCTTAA 7490
Query 46335 CAAGCTTGCGCCCGACACC--GT-GCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAG 46389
||| | || || | | | || |||| ||| || || || ||| ||| |||
Sbjct 7491 CAACC--GCCCCAGCAAGCAGGTCATTGAGGACATCATCGTCGACGCCGTGCGCATCGAG 7548
Query 46390 AAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATG 46449
||||||| | || | || ||||| |||||||| ||||||||| | | |||
Sbjct 7549 CAGGAGTTCCTCACCGAGGCCCTGCCGTGCGCCCTGCTCGGCATGAACTCCAACCTGATG 7608
Query 46450 TGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGC-CGAAGCA 46508
| ||||| ||||| || || ||||| |||||||| | | || || | ||||
Sbjct 7609 AAGCAGTACATTGAGTTCGTCGCCGACCGCCTGCTCGT-CGCCCTCGGCAACGAGAAGGT 7667
Query 46509 TTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAA 46568
| | || || || || || || ||| | |||||||| || | ||||| || ||
Sbjct 7668 GTACCGGTCGACAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAA 7727
Query 46569 TTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| ||||| |||||||||||||||||
Sbjct 7728 CTTCTTCGAGAAGCGCGTCGGCGAGTA 7754
>seq88
Length=36327
Score = 102 bits (112), Expect = 8e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||||||||| || || | || |||||| || |||||||| |||
Sbjct 33342 GCCGCCACGGAGACGCAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGA 33283
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || || ||||| | ||||||||| ||| |||| |||||||||||||| || ||
Sbjct 33282 CAGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGGGG 33223
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
||| || || || || ||| | | || ||||| | || | ||||| | || || |
Sbjct 33222 GATACCCTCCTTATC-CTGAATCTTTGACTTGACGTTGTCGATCGTATCCGAAGATTCCA 33164
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | |||| || || || || || || || ||||| |||||||||
Sbjct 33163 CTTCCAGAGTAATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATG 33114
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||| | || || || || || | ||| |||||| ||||||||||| |||
Sbjct 33114 GCCACCGCGGAGCCGGAGGACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 33055
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || || ||||| || |||||||| || | || | ||||||||||| |||||
Sbjct 33054 CAAAGTCCGACCATCCTCGAGTTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGG 32995
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || || || ||| ||| ||| | | || | || || | ||||| |
Sbjct 32994 GATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCAATCGTGTCTGACGACTCAAC 32935
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || ||||||||||||||
Sbjct 32934 CTCCAATGTGATGGTCTTTCCCGTCAGGGTCTTCACGAAAATCTGCAT 32887
>seq4893
Length=312
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081
|||||| || || | || |||||| || |||||||| ||||| | || ||| |||
Sbjct 300 CAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTC 241
Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141
||| | ||||||||| ||| | || | ||||||||||||||||| || || || |||||
Sbjct 240 CTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 181
Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201
||| ||| ||||| | || | || || | | ||| | || | |||| ||
Sbjct 180 CTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTAATCGT 121
Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || || || |||||||| || |||||
Sbjct 120 CTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 88
>seq2403
Length=4098
Score = 98.7 bits (108), Expect = 9e-16
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| ||||||||||| || | ||||| ||||| ||||| ||||| || |||
Sbjct 2169 CCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCGAGCTGTTTGCCCGCAAAGA 2228
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | ||||||||||| || || || || || ||||| ||| ||| ||||| | |
Sbjct 2229 TCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 2288
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| |||| ||| | ||| ||||| || || || || ||||
Sbjct 2289 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGA 2348
Query 131225 AAATCTGCA 131233
| |||||||
Sbjct 2349 AGATCTGCA 2357
>seq2035
Length=5329
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||| | || | ||| |||||| || || ||||||||
Sbjct 1022 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAG 1081
Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| | || | ||||| ||||||||||| || |||| | ||||||||||| || ||
Sbjct 1082 AGGGTCCTGCCA-TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGG 1140
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || ||| | ||||| |
Sbjct 1141 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATTGTGTCGCTCGACTCCAC 1200
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | || || || || || || || ||||| |||||||||
Sbjct 1201 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 1249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471977186634240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |