Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq88 95.1 1e-14
seq4893 91.5 1e-13
>seq88
Length=36327
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || |||| || |||| || || ||| |||||| || ||||||||||||| |
Sbjct 33113 CCACCGCGGAGCCGGAGGACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 33054
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | ||||| | ||| ||||| ||| |||| || ||||| ||||| |||
Sbjct 33053 AAAGTCCGACCATCCTCGAGTTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGG 32994
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||| || || || | | |||||| | | | | ||||| | |||
Sbjct 32993 ATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCAATCGTGTCTGACGACTCAACC 32934
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| |||||||| ||||| ||||| || || || |||||||||||
Sbjct 32933 TCCAATGTGATGGTCTTTCCCGTCAGGGTCTTCACGAAAATCTGCAT 32887
>seq4893
Length=312
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777
|| ||||| |||| |||| |||| |||||| || |||||||||||| | ||
Sbjct 305 AGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGC 246
Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837
|||||||||| || |||||||| |||| |||||||| |||||| ||| | ||||||
Sbjct 245 CCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCC 186
Query 16838 TTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897
||||| || | | ||| || | | | | ||||| | |||| |||| ||
Sbjct 185 TTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTA 126
Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || || || || || || || |||||
Sbjct 125 ATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 88
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405058200207640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |