Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq5934 140 2e-28 seq5530 140 2e-28 seq5449 140 2e-28 seq5443 140 2e-28 seq5107 140 2e-28 seq5079 140 2e-28 seq4115 140 2e-28 seq4055 140 2e-28 seq3916 140 2e-28 seq5604 134 9e-27 seq5384 134 9e-27 seq4620 134 9e-27 seq6002 132 3e-26 seq5835 132 3e-26 seq5611 114 9e-21 seq88 109 4e-19 seq5544 104 2e-17 seq5062 104 2e-17 seq2035 93.3 3e-14 seq5342 84.2 1e-11 >seq5934 Length=208 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 93 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 152 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 153 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 187 >seq5530 Length=241 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 97 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 38 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 37 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3 >seq5449 Length=250 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 12 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 71 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 72 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 106 >seq5443 Length=251 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 158 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 99 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 98 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 64 >seq5107 Length=288 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 150 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 209 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 210 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 244 >seq5079 Length=292 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 102 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 161 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 162 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 196 >seq4115 Length=516 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 271 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 212 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 211 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 177 >seq4055 Length=552 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 376 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 317 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 316 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 282 >seq3916 Length=675 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 361 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 302 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 301 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 267 >seq5604 Length=235 Score = 134 bits (148), Expect = 9e-27 Identities = 88/96 (92%), Gaps = 6/96 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAAT-CTCG 25955 |||||||||||||||||||||||||||||||||||||||||||| || ||| |||| Sbjct 99 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCCTCG 158 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||| |||||||||||||||||||||||||||| Sbjct 159 TTAATCCATTCATGCGCGTCACTAATTAGATGACGA 194 >seq5384 Length=255 Score = 134 bits (148), Expect = 9e-27 Identities = 88/96 (92%), Gaps = 6/96 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 24 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 83 Query 25957 TAATCCTTTCATGCG-CGTCACTAATTAGATGACGA 25991 |||||| |||||||| |||||||||||||||||||| Sbjct 84 TAATCCATTCATGCGCCGTCACTAATTAGATGACGA 119 >seq4620 Length=354 Score = 134 bits (148), Expect = 9e-27 Identities = 85/92 (92%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 112 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 171 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGA 25988 |||||| ||||||||||||||||||||||||| Sbjct 172 TAATCCATTCATGCGCGTCACTAATTAGATGA 203 >seq6002 Length=202 Score = 132 bits (146), Expect = 3e-26 Identities = 87/95 (92%), Gaps = 6/95 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct 86 AAGCCCGTTCCCTTGGCTGTGGTTTCGCT-GATAGTAGATAGGGACAGTGGGAATCTCGT 144 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 145 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 179 >seq5835 Length=215 Score = 132 bits (146), Expect = 3e-26 Identities = 87/95 (92%), Gaps = 6/95 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||| ||||||| || |||||||| Sbjct 121 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT-GATAGGGACAGTGGGAATCTCGT 63 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 62 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 28 >seq5611 Length=235 Score = 114 bits (126), Expect = 9e-21 Identities = 74/81 (91%), Gaps = 5/81 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 155 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 214 Query 25957 TAATCCTTTCATGCGCGTCAC 25977 |||||| |||||||||||||| Sbjct 215 TAATCCATTCATGCGCGTCAC 235 >seq88 Length=36327 Score = 109 bits (120), Expect = 4e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| || || ||||||||||| ||||| ||||| || |||||| || | || || Sbjct 33095 ACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAAAGTCCGACCATCCTCG 33036 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||| || |||||||| || ||||| || || || | |||| || || || || Sbjct 33035 AGTTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCTTGG 32976 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCT--CCACTTTCAACTTCTAATGTAATAGTTT 38286 || || ||||||||| | | || ||| | || ||||| || ||||| || || | Sbjct 32975 ATCTTCGACTTCACATTGTCAATCGTGTCTGACGAC--TCAACCTCCAATGTGATGGTCT 32918 Query 38287 TACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||||| ||| |||||||| |||||||| Sbjct 32917 TTCCCGTCAGGGTCTTCACGAAAATCTGCAT 32887 >seq5544 Length=240 Score = 104 bits (114), Expect = 2e-17 Identities = 68/75 (91%), Gaps = 5/75 (7%) Strand=Plus/Plus Query 25922 GGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCA 25976 |||||||||||||||||||||||| || |||||||||||||| ||||||||||||| Sbjct 1 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 60 Query 25977 CTAATTAGATGACGA 25991 ||||||||||||||| Sbjct 61 CTAATTAGATGACGA 75 >seq5062 Length=294 Score = 104 bits (114), Expect = 2e-17 Identities = 68/75 (91%), Gaps = 5/75 (7%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 75 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 16 Query 25957 TAATCCTTTCATGCG 25971 |||||| |||||||| Sbjct 15 TAATCCATTCATGCG 1 >seq2035 Length=5329 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | || || | ||| | || || ||||||||||| || ||||||||||| || Sbjct 1021 ACCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGA 1080 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | | || || | || || || ||||| || ||||| || || || | ||| Sbjct 1081 GAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGG 1140 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTCA 38267 || ||| || |||||| || || ||| ||||| | || || | ||| || || Sbjct 1141 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATTGTGTCGCTCGAC--TCC 1198 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 || || | || ||||| || ||||| | ||| |||||||| ||||||||| || Sbjct 1199 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGGTT 1252 >seq5342 Length=260 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/64 (89%), Gaps = 5/64 (8%) Strand=Plus/Minus Query 25933 ATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATG 25987 ||||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct 260 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 201 Query 25988 ACGA 25991 |||| Sbjct 200 ACGA 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334922560027916