Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq5934 140 2e-28
seq5530 140 2e-28
seq5449 140 2e-28
seq5443 140 2e-28
seq5107 140 2e-28
seq5079 140 2e-28
seq4115 140 2e-28
seq4055 140 2e-28
seq3916 140 2e-28
seq5604 134 9e-27
seq5384 134 9e-27
seq4620 134 9e-27
seq6002 132 3e-26
seq5835 132 3e-26
seq5611 114 9e-21
seq88 109 4e-19
seq5544 104 2e-17
seq5062 104 2e-17
seq2035 93.3 3e-14
seq5342 84.2 1e-11
>seq5934
Length=208
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 93 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 152
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 153 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 187
>seq5530
Length=241
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 97 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 38
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 37 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3
>seq5449
Length=250
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 12 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 71
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 72 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 106
>seq5443
Length=251
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 158 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 99
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 98 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 64
>seq5107
Length=288
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 150 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 209
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 210 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 244
>seq5079
Length=292
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 102 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 161
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 162 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 196
>seq4115
Length=516
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 271 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 212
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 211 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 177
>seq4055
Length=552
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 376 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 317
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 316 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 282
>seq3916
Length=675
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 361 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 302
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 301 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 267
>seq5604
Length=235
Score = 134 bits (148), Expect = 9e-27
Identities = 88/96 (92%), Gaps = 6/96 (6%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAAT-CTCG 25955
|||||||||||||||||||||||||||||||||||||||||||| || ||| ||||
Sbjct 99 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCCTCG 158
Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
||||||| ||||||||||||||||||||||||||||
Sbjct 159 TTAATCCATTCATGCGCGTCACTAATTAGATGACGA 194
>seq5384
Length=255
Score = 134 bits (148), Expect = 9e-27
Identities = 88/96 (92%), Gaps = 6/96 (6%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 24 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 83
Query 25957 TAATCCTTTCATGCG-CGTCACTAATTAGATGACGA 25991
|||||| |||||||| ||||||||||||||||||||
Sbjct 84 TAATCCATTCATGCGCCGTCACTAATTAGATGACGA 119
>seq4620
Length=354
Score = 134 bits (148), Expect = 9e-27
Identities = 85/92 (92%), Gaps = 5/92 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 112 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 171
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGA 25988
|||||| |||||||||||||||||||||||||
Sbjct 172 TAATCCATTCATGCGCGTCACTAATTAGATGA 203
>seq6002
Length=202
Score = 132 bits (146), Expect = 3e-26
Identities = 87/95 (92%), Gaps = 6/95 (6%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct 86 AAGCCCGTTCCCTTGGCTGTGGTTTCGCT-GATAGTAGATAGGGACAGTGGGAATCTCGT 144
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 145 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 179
>seq5835
Length=215
Score = 132 bits (146), Expect = 3e-26
Identities = 87/95 (92%), Gaps = 6/95 (6%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct 121 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT-GATAGGGACAGTGGGAATCTCGT 63
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 62 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 28
>seq5611
Length=235
Score = 114 bits (126), Expect = 9e-21
Identities = 74/81 (91%), Gaps = 5/81 (6%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 155 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 214
Query 25957 TAATCCTTTCATGCGCGTCAC 25977
|||||| ||||||||||||||
Sbjct 215 TAATCCATTCATGCGCGTCAC 235
>seq88
Length=36327
Score = 109 bits (120), Expect = 4e-19
Identities = 152/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168
||||| || || ||||||||||| ||||| ||||| || |||||| || | || ||
Sbjct 33095 ACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAAAGTCCGACCATCCTCG 33036
Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228
| ||| || |||||||| || ||||| || || || | |||| || || || ||
Sbjct 33035 AGTTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCTTGG 32976
Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCT--CCACTTTCAACTTCTAATGTAATAGTTT 38286
|| || ||||||||| | | || ||| | || ||||| || ||||| || || |
Sbjct 32975 ATCTTCGACTTCACATTGTCAATCGTGTCTGACGAC--TCAACCTCCAATGTGATGGTCT 32918
Query 38287 TACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||||| ||| |||||||| ||||||||
Sbjct 32917 TTCCCGTCAGGGTCTTCACGAAAATCTGCAT 32887
>seq5544
Length=240
Score = 104 bits (114), Expect = 2e-17
Identities = 68/75 (91%), Gaps = 5/75 (7%)
Strand=Plus/Plus
Query 25922 GGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCA 25976
|||||||||||||||||||||||| || |||||||||||||| |||||||||||||
Sbjct 1 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 60
Query 25977 CTAATTAGATGACGA 25991
|||||||||||||||
Sbjct 61 CTAATTAGATGACGA 75
>seq5062
Length=294
Score = 104 bits (114), Expect = 2e-17
Identities = 68/75 (91%), Gaps = 5/75 (7%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 75 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 16
Query 25957 TAATCCTTTCATGCG 25971
|||||| ||||||||
Sbjct 15 TAATCCATTCATGCG 1
>seq2035
Length=5329
Score = 93.3 bits (102), Expect = 3e-14
Identities = 162/234 (69%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | || || | ||| | || || ||||||||||| || ||||||||||| ||
Sbjct 1021 ACCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGA 1080
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
| | | || || | || || || ||||| || ||||| || || || | |||
Sbjct 1081 GAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGG 1140
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTCA 38267
|| ||| || |||||| || || ||| ||||| | || || | ||| || ||
Sbjct 1141 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATTGTGTCGCTCGAC--TCC 1198
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|| || | || ||||| || ||||| | ||| |||||||| ||||||||| ||
Sbjct 1199 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGGTT 1252
>seq5342
Length=260
Score = 84.2 bits (92), Expect = 1e-11
Identities = 57/64 (89%), Gaps = 5/64 (8%)
Strand=Plus/Minus
Query 25933 ATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATG 25987
||||||||||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct 260 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 201
Query 25988 ACGA 25991
||||
Sbjct 200 ACGA 197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334922560027916
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