Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq270 82.4 9e-11 >seq270 Length=23592 Score = 82.4 bits (90), Expect = 9e-11 Identities = 130/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 15017 ATCGTAAAGGTTGTCATTGGCCAGATGCGCACGCCC-GAGATTGGCGACAAGTTTTGCTC 15075 ||||||||||| | | |||| | ||| ||||| ||| | || |||||||||| || Sbjct 1185 ATCGTAAAGGTCCAAACTCGCCAAACACGC-CGCCCAGAGCTCGGTGACAAGTTTTCGTC 1127 Query 15076 TGGT-ATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTA 15134 | | | ||| |||||| ||| ||| || ||| | |||||||||||||||||| Sbjct 1126 TCGCCACGGCCAAAAAGGTGTCGT-CGGTATCATTGTTGACCAGGAAGACATGCCCTTCT 1068 Query 15135 CCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGA 15194 | | || ||| | || ||||| ||||| |||||| || | ||||||| ||||||| Sbjct 1067 CGGACTCGGGCCTCGTTCCGGACATCATCATGAACCCCCACGGTTTCCCGTCGCGCATGA 1008 Query 15195 C 15195 | Sbjct 1007 C 1007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611345870473600