Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 156 9e-33
seq1226 86.0 1e-11
>seq1383
Length=8527
Score = 156 bits (172), Expect = 9e-33
Identities = 531/821 (65%), Gaps = 15/821 (2%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | |||||||| ||||||||||||||||||||||||
Sbjct 7736 TCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTTGTC 7677
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| |||| ||| | ||| || || |||| | |||||| || || ||||| |
Sbjct 7676 GACCGGTACACCTTCTCGTTGCCGAGGGCGACGAGCAGGCGGTCGGCGACGAACTCAATG 7617
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| |||||| | ||||||||||| | || || || | ||||| || |
Sbjct 7616 TACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGGGCGCACGGCAGGGCCTCGGTGAGG 7557
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798
|| |||| ||| || || || || | | || ||| | ||||| | | | |
Sbjct 7556 AACTCCTGCTCGATGCGCACGGCGTCGACGATGATGTCCTCAATGACCTGCTTGCTGGGG 7497
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858
| | ||||| || | ||| |||| || | | || | ||| |||||||||||
Sbjct 7496 CGG-TTGTTA---AGGTGCGAGAACAGCAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTC 7441
Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918
|| ||||| ||||||||| | |||||| ||||| | || || ||| |||||||
Sbjct 7440 ACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCA 7381
Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978
|||||| | | ||||| || ||| | | |||||||||| | | || || ||
Sbjct 7380 GAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGCAGCAAACGCGACCAG 7321
Query 251979 GCGCTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTT 252035
||||| ||||| |||||| | | | | || | | ||||| | ||||||||
Sbjct 7320 GCGCTGGGCAAAGGTCGACTTCTGGTCAGTGATCCACCGCAGGGCCCAGTCGGCCTTCTT 7261
Query 252036 TCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTC 252095
| | |||||||| || ||||| |||| || || | |||| |||| ||||
Sbjct 7260 GCGGATGGCGGGGATGGTGTCGATGGCATTGAACAGGTGCGTGCGCTGGGCAGGCTCCTT 7201
Query 252096 GATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTG 252155
|||| | |||| || || ||||| |||| || |||||| || | | |||||
Sbjct 7200 GATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTG 7141
Query 252156 GTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAAT 252215
| | | ||||| || || ||| | ||| || | ||| | | |
Sbjct 7140 GAAGCCGTAGAAGCAGCGAGCCTCCGGGACCTGGACCTCGCCGCTGAAGCGCTCGACCAG 7081
Query 252216 GTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGTG 252275
|||||| | || ||||| || | || ||||| | || ||| ||||||||
Sbjct 7080 GTTCTCGTTGACGATGCCGTCCGACGCGGCGAAGAAAGCGAGGATGTGAGAGATGAAGTA 7021
Query 252276 ACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGG--AACT 252333
|||||||||||||| ||||| ||||||| | ||||| | ||||| ||
Sbjct 7020 CTTCTCATCGTCGTTGATCTTGTTGTTCCAGTCGTGGAGGTCCT--TGGAGAGGTCAATC 6963
Query 252334 TCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT 252374
|| || | |||||||| | | | | ||||||||||||||
Sbjct 6962 TCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 6922
>seq1226
Length=9422
Score = 86.0 bits (94), Expect = 1e-11
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| ||||| ||||| |||| ||||||||||| || |||| ||||| ||||| |||
Sbjct 3405 GGCGAGGACCTGTGCAACTGCACCTTCTCGCTCGCCTACGGTGCCAAGATCCTGCTTAAC 3346
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
||| |||| | ||||||| ||| | || |||||||| ||| ||||| || |
Sbjct 3345 CAGACCAGCCTGCGCCTCAAGCGCGGCCAGCGTTATGGTCTGTGCGGCCCCAACGGTTCC 3286
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||| || ||||| ||||| |||| ||| | | ||| ||||| | |||
Sbjct 3285 GGCAAGTCCACCCTGATGCGTGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 3227
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557
|| || | ||| || | || |||||||||
Sbjct 3226 GAGCGAAGTCAAGACCGTCTTCGTCGAGCACGAC 3193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027757310956276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |