Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 201 2e-46
seq88 167 4e-36
seq2035 152 9e-32
seq2403 140 6e-28
seq1226 95.1 2e-14
seq5961 89.7 9e-13
seq1697 87.8 3e-12
>seq1383
Length=8527
Score = 201 bits (222), Expect = 2e-46
Identities = 568/861 (66%), Gaps = 15/861 (2%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
||||||||| |||||||||||||| || || |||||||||||||| |||||| |
Sbjct 7773 CATGACGCCGGCCTTCTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCC 7714
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGG-TTCTCGGCGCCAAACTGCTTGGGGTAAC 10053
||| || ||| |||||||||||| |||||| || ||| | | || ||| || |
Sbjct 7713 GAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTTGTCGAC-CGGTACACCTTCTCGTTGC 7655
Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113
|||| || || | |||||| || |||||||| |||||||| ||||||||| ||||
Sbjct 7654 CGAGGGCGACGAGCAGGCGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGT 7595
Query 10114 TCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173
||||||| | || | ||| || | ||| ||| | ||| |||| ||| || || |
Sbjct 7594 TCATGCCGAGCAGGGCGCACGGCAGGGCCTCGGTGAGGAACTCCTGCTCGATGCGCACGG 7535
Query 10174 CTTCCTCGACGATG--CTC-TTTACC-ACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAA 10229
| || ||| |||| ||| | ||| | | ||| | | ||||| || | |||
Sbjct 7534 CGTCGACGATGATGTCCTCAATGACCTGCTTGCTGGGGC-GGTTGTT---AAGGTGCGAG 7479
Query 10230 TACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289
|||| || | || | |||||| |||||||| || ||||| |||||||||
Sbjct 7478 AACAGCAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAG 7419
Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349
|| ||| ||||||||||| || || || |||||||| |||| | || | |||
Sbjct 7418 AAGGTCAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCG 7359
Query 10350 GAGAACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAG---GAGCG 10405
||| | | |||||| || ||| | | ||||| ||||||| || ||| ||
Sbjct 7358 CTGAAGAAGATACCCTCGACAGCA-GCAAACGCGACCAGGCGCTGGGCAAAGGTCGACTT 7300
Query 10406 GTCGCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTC 10465
| | | | | | |||||| | |||||||| | | ||| ||||| || ||
Sbjct 7299 CTGGTCAGTGATCCACCGCAGGGCCCAGTCGGCCTTCTTGCGGATGGCGGGGATGGTGTC 7240
Query 10466 GATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAG 10525
||| || | ||| || | | |||| || |||| || | |||| ||||||
Sbjct 7239 GATGGCATTGAACAGGTGCGTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAG 7180
Query 10526 GGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGC 10585
|||||| ||| ||||| | |||| | |||| | ||||||| || ||
Sbjct 7179 GGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGC 7120
Query 10586 CGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATC 10645
| ||| || ||| || || ||| | | ||||||||| | || ||||| ||
Sbjct 7119 CTCCGGGACCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTC 7060
Query 10646 GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTT 10705
| || ||||| |||||||||| |||||||| |||||| ||||| | ||
Sbjct 7059 CGACGCGGCGAAGAAAGCGAGGATGTGAGAGATGAAGTACTTCTCATCGTCGTTGATCTT 7000
Query 10706 TTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGC 10765
| |||||| | |||| | ||| | | |||||| |||||||||||| ||
Sbjct 6999 GTTGTTCCAGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCGGCGGTCCAGAAAGAAGC 6940
Query 10766 AACGGCCTTCTTGTACATCTG 10786
|||||||||||||||||||
Sbjct 6939 CTCGGCCTTCTTGTACATCTG 6919
>seq88
Length=36327
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||||||| || || ||| || |||||||| || |||||
Sbjct 33341 CCGCCACGGAGACGCAGCACCAAGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAC 33282
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| ||||| || |||||||| || ||||| || | | || ||||| || ||
Sbjct 33281 AGAGTCCGACCATCCTCCAACTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGGGGG 33222
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || |||||||||| ||||||| ||||| || || | ||||| |||
Sbjct 33221 ATACCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATCGTATCCGAAGATTCCACT 33162
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || || || |||||||||||||||||||| ||||||||
Sbjct 33161 TCCAGAGTAATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 33115
Score = 131 bits (144), Expect = 3e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||||| || | ||| || ||| || || ||||| || ||||| ||
Sbjct 32885 CCACCGCGCAGGCGCAGGACAAGGTGCAGAGTGCTTTCCTTCTGGATATTGTAATCCGAA 32826
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | || || || || || || || | || ||||| || |||
Sbjct 32825 AGAGTGCGACCATCCTCGAGTTGTTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGGA 32766
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||| ||| ||||||||||| | || || ||
Sbjct 32765 ATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTGTCGGAAGACTCCACC 32706
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || || || |||||||||||||| || |||||
Sbjct 32705 TCGAGGGTGATAGTCTTCCCGGTCAGGGTCTTGACGAAGATTTGCAT 32659
>seq2035
Length=5329
Score = 152 bits (168), Expect = 9e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || ||| ||| || ||||| || ||||| |||
Sbjct 1022 CCACCACGCAGGCGGAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAG 1081
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| ||||| ||||| || | |||||| || || || || || | || ||||| || ||
Sbjct 1082 AGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGG 1141
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
||||| |||||||| || ||||| | |||||| ||||| ||||| ||| || || ||
Sbjct 1142 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATTGTGTC-GCTCGACTCCAC 1200
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || |||||||||||||| ||||| ||||||||
Sbjct 1201 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 1248
>seq2403
Length=4098
Score = 140 bits (154), Expect = 6e-28
Identities = 143/187 (76%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| || ||||| || || ||||| || | ||||| || | ||| || || || || ||
Sbjct 2171 TTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCGAGCTGTTTGCCCGCAAAGATC 2230
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || |||||||| |||||||| |||||||| || ||||| | |||||| |||
Sbjct 2231 AGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 2290
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453
|||||||| | || || || || | ||||||||| || |||||||||||||| |||||
Sbjct 2291 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGAAG 2350
Query 68454 ATCTGCA 68460
|||||||
Sbjct 2351 ATCTGCA 2357
>seq1226
Length=9422
Score = 95.1 bits (104), Expect = 2e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876
|||||| ||||| | ||| | || || ||||| | |||||| |||||| | ||
Sbjct 3232 GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCACGCATCAGGGTGGACTTGCCGGAACC 3291
Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936
|||||| ||| || || ||| | | |||||||||| | |||| || ||| ||
Sbjct 3292 GTTGGGGCCGCACAGACCATAACGCTGGCCGCGCTTGAGGCGCAGGCTGGTCTGGTTAAG 3351
Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
||||||||| |||| ||||| || ||||| ||| | |||||||||||| ||||| ||
Sbjct 3352 CAGGATCTTGGCACCGTAGGCGAGCGAGAAGGTGCAGTTGCACAGGTCCTCGCCCTCTTC 3411
>seq5961
Length=206
Score = 89.7 bits (98), Expect = 9e-13
Identities = 95/123 (77%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| |||||||| || || ||||||||||| || ||||| ||||||| ||||| |||
Sbjct 204 TGCTGGTCGGGCGGGATCCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTG 145
Query 68400 TCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTG 68458
|| ||| ||||| || |||| ||||| || || || || || ||||| ||||| || ||
Sbjct 144 TC-GCTCGATTCAACCTCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTG 86
Query 68459 CAT 68461
|||
Sbjct 85 CAT 83
>seq1697
Length=6694
Score = 87.8 bits (96), Expect = 3e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 195992 TGGGTCGTCTTTGACGAAATCCACTACATGTCCGACGATGCGCGTGGTACCGTGTGGGAA 196051
|||||| ||||||||||||||||||||||| ||| | | || ||| ||| |||||
Sbjct 3137 TGGGTCATCTTTGACGAAATCCACTACATGCGTGACAAGACTCGCGGTGTCGTCTGGGAG 3078
Query 196052 GAAAGCCTTATCCTCATCCCGGATACCATCCGCTGTGTCTTTTTGTCCGCGACTGTTCCC 196111
|||| | | |||||| ||||||| | | | ||||||||||| || || | |||
Sbjct 3077 GAAACCATCATCCTCCTCCCGGACAAGGTTAAATTCGTCTTTTTGTCAGCCACCATCCCC 3018
Query 196112 AACGCCCGTGACTTTGCCTTGTGGTTCTCGAAGATGCA 196149
|||||| | || ||| |||| || | ||||| ||
Sbjct 3017 AACGCCTTCCAGTTCGCCGAGTGGATCGCCAAGATTCA 2980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921552863589920
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