Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq979 457 2e-123
seq1383 408 8e-109
>seq979
Length=11123
Score = 457 bits (506), Expect = 2e-123
Identities = 1245/1886 (66%), Gaps = 65/1886 (3%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
|||| || | ||| | |||| |||| ||| | |||||||||||||| |||||||| |
Sbjct 5269 TGAATTGAATGGGCTGGGCGGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTGAGAC 5210
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
|| |||| || || ||||||| || | ||| ||| | |||
Sbjct 5209 CAAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCAT-----------GCTCGG 5161
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCG 243919
| |||| || | |||||| |||||| ||| |||| ||| | |||| || || ||
Sbjct 5160 C-TCGCGCATGTGAATGTTGAGCGACTGGGACTGATCGATGAAAG-CGCCACGATCGGCA 5103
Query 243920 GCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978
||||| | || ||| | |||||| || || | | |||||||||| | |||||
Sbjct 5102 GCCATCTGAACGACGGTGCG-CTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTGAT 5044
Query 243979 GT-GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037
| | ||||| | ||||||||| | ||| || | | |||||| || |
Sbjct 5043 ATCGGTCGGG-ATGTTAGGGATGTTCTGGATCGAACCACCATCGGCGATGATGCGGTTCT 4985
Query 244038 GCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCA 244094
|||||| ||| ||| || |||| | | || ||| || | ||| | || |
Sbjct 4984 TCATGTTGTCGGACCAGAGACCCATGTCGACAAGGTCCTT---CAAGAGCCAGGGGTTGA 4928
Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154
| ||||| ||||| || | || || || |||||||||| |||| || |||||||
Sbjct 4927 CAACCTGGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACGTGTAGGGCTCGA 4868
Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214
|| || |||||||||| || |||| ||| || ||||||||||||| | ||||
Sbjct 4867 AGCATTCGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGGGCGCGAGGAGCA 4808
Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274
||||||| || || ||| || ||| | ||||| ||| ||||||||| | ||
Sbjct 4807 AGCTGTTCCGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCCAGTCCCAGAGGC 4748
Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334
| |||| || ||| | ||||||||| |||| || | |||| | || |
Sbjct 4747 C-----GGTCGGCG----TGACGTTCCACATGTCGTACTGGAGGATACCCTGGGATACCG 4697
Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGA 244394
|| || || ||||||| ||| | || | || |||||| | || || |
Sbjct 4696 GGGATCCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGGTCA 4637
Query 244395 GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGG 244454
| || |||| ||||||||||||||||| ||| |||| || || |||| | |
Sbjct 4636 GAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAGACT 4577
Query 244455 TGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGG 244514
||| || |||| | | || ||| | |||||||| ||||| || |||| ||||||||
Sbjct 4576 CGAAAGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGATGG 4517
Query 244515 GTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATC 244573
| | ||| ||| ||||| | | | | || | || || ||||| |||| |||||||
Sbjct 4516 GGCGGTGGCGCATGTTGCTGTTGTAAGCCTCCTGG-ACCGGGTAGTGGTTGACGTCGATG 4458
Query 244574 ACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC 244633
| |||||| |||||||| | | || |||| ||| |||| ||| ||||| ||
Sbjct 4457 ATCTTGTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTGGAAGTCATAG 4398
Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGG 244693
| | ||| | | || || || |||| ||||| | |||||||
Sbjct 4397 AC------ACCCTTG----TTGTAGTCG--ACGAACTGAGGAAGGGCCAGCGAGGCCAGG 4350
Query 244694 TTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTG 244753
||||||||||| ||||| || | | ||||| || ||||| ||||| ||||| |
Sbjct 4349 TTGCAGACGGCAACCTCGTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAG 4290
Query 244754 CACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGC 244813
| ||||||||| |||| || || ||| |||| ||||||| ||||||||||||
Sbjct 4289 CTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGC 4230
Query 244814 ATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCC 244873
|||||||| ||||||||| ||| || |||||| | | |||||| | |||
Sbjct 4229 ATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGGCC 4170
Query 244874 TTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCG 244933
|||| ||| | ||| | ||| | |||||| ||||||||||||||||||
Sbjct 4169 TTGATAGTCTTACGACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACTCG 4110
Query 244934 GGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCG 244993
|| || ||| | |||||||||||| |||||||| ||| ||||||| |||
Sbjct 4109 TCACCATAGCAATCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCG 4050
Query 244994 CCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTG 245053
| || ||| | || ||||||||||||||| |||||||||||| ||||||| || |
Sbjct 4049 TTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGA 3990
Query 245054 GTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACG 245113
| | || ||| ||| |||||| | || || | || |||||||||||| ||
Sbjct 3989 GCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCG 3930
Query 245114 TGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACC 245173
||||| ||||| | ||||| || | ||| ||||| ||||||||||| || |||| |
Sbjct 3929 TGCCAAGGCTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGGT----C 3874
Query 245174 ATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229
| | | || ||| |||||||| || || | || | ||||| || || |||
Sbjct 3873 AACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCC 3814
Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289
||||||||| |||||| | || | | | || | | |||| | ||| | ||
Sbjct 3813 GTTGGTGCCGGCGATGTATGATCCAGTCGCACGGATGCGGTGGATGTTGAGGCCGATGCC 3754
Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349
||| || |||||| || | |||||| |||| | |||| |||||||| |||||
Sbjct 3753 GCCTGCCATCTTGGAAATCATGGCGCAAGTCTTAAGACTGTCGTAGATGCCCTCGATGCT 3694
Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409
||| |||||||| || ||| ||||| ||||| ||||||| || ||| | | | |||
Sbjct 3693 GTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTGGGCCTGAGGGGTACCGGCGTT 3634
Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGA- 245468
||| || |||||| ||| || || ||| | | | || | || ||| |||| ||
Sbjct 3633 GAAGAGGGTGGGGGAGGCATGTGTGAAGAACTTGTTGGACATGAGGTTGTATGTCTCGAT 3574
Query 245469 GCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG-G 245527
| | || || | |||||| || ||| | ||| | ||||| ||||||| |
Sbjct 3573 GACGCGC-TCCACGTTGTCTCCCCAGATGCCGACGGCAACACGCATGATCATGTGCTGTG 3515
Query 245528 GGCGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTG 245584
|||| |||| || || | | | ||| || | ||| |||||||| || ||||||
Sbjct 3514 GGCG-CTCGACAATCTTGCCGTTGAG---CTTCAGGAGGTATGAGCGCTCCAGGGTCTTG 3459
Query 245585 AACCCAAAGTACGAGTAGCCAAAGTC 245610
|| ||||||||| |||| |||||
Sbjct 3458 AAGCCAAAGTACTGGTAGTTGAAGTC 3433
>seq1383
Length=8527
Score = 408 bits (452), Expect = 8e-109
Identities = 619/861 (72%), Gaps = 30/861 (3%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || || ||||||||||||||||||||||||
Sbjct 6913 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGACCTC 6972
Query 42360 GCCAAGGACACGGCCGGCTGGGAGT-CACTGTCTGAGA--ACGAAAAGTTTTTCCTCAAA 42416
|||||||| || |||| | || || || | || |||| ||| ||
Sbjct 6973 TCCAAGGACCTCCACGACTGGAACAACAAGATCAACGACGATGAGAAGTACTTCATCTCT 7032
Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476
|||| || || ||||||||||| || |||||||| ||||| |||||||||| | |
Sbjct 7033 CACATCCTCGCTTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCGC 7092
Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536
|||| ||||| ||| | ||||| ||||||||||||||||||||||| ||
Sbjct 7093 TTCAGCGGCGAGGTCCAGGTCCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGATG 7152
Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCC 42593
|||||| | ||||||||| ||| || ||||||| |||| |||||| ||| ||
Sbjct 7153 GAGAACATCCACTCTGAGACCTACTCC---CTGCTCATTGACACCTACATCAAGGAGCCT 7209
Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653
| | |||| | |||||||| ||||| || || || ||| |||| ||||||||
Sbjct 7210 GCCCAGCGCACGCACCTGTTCAATGCCATCGACACCATCCCCGCCATCCGCAAGAAGGCC 7269
Query 42654 GACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGC 42712
|||||||| || |||||| | | || || | | || || | | || | ||||| ||
Sbjct 7270 GACTGGGCCCTGCGGTGGATC-ACTGACCAGAAGTCGACCTTTGCCCAGCGCCTGGTCGC 7328
Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772
||| | || |||||||| ||||||||| || ||||| ||||||||||||||||||||
Sbjct 7329 GTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAA 7388
Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
| || || || |||||||| || |||||||| ||||| |||||| | |||||||
Sbjct 7389 GAAGCGCGGCCTC-ATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGG 7447
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA 42891
| || || | ||||| |||||||| ||||||||| ||||| | |||| | | | |
Sbjct 7448 GTCTCCACACCGACTTCGCCTGCCTGCTGTTCTCG---CACCTTA---ACAACCGCCCCA 7501
Query 42892 AGGAGCGGGTC---CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948
||| |||| || ||||||| || |||||| |||||| ||||||||||||
Sbjct 7502 GCAAGCAGGTCATTGAGGACATCATCGTCGACGCCGTGCGCATCGAGCAGGAGTTCCTCA 7561
Query 42949 CGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATC 43007
| || | ||| ||||| ||||| ||||||||||| | |||| ||| |||||||
Sbjct 7562 CCGAGGCCCTG-CCGTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATT 7620
Query 43008 CAGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACG 43064
||| ||||||||||| || || || ||| | || | || | | ||| ||
Sbjct 7621 GAGTTCGTCGCCGACCGCCTGCTCGTCGCC--CTCGGCAACGAGAAG-GTGTACCGGTCG 7677
Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124
| |||||||||||| |||||||||||||| | | |||||||||||||| ||||||
Sbjct 7678 ACAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAG 7737
Query 43125 AAGCGCGTCGCCGACTACCAG 43145
|||||||||| ||| ||||||
Sbjct 7738 AAGCGCGTCGGCGAGTACCAG 7758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944267949607360
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