Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq979 457 2e-123 seq1383 408 8e-109 >seq979 Length=11123 Score = 457 bits (506), Expect = 2e-123 Identities = 1245/1886 (66%), Gaps = 65/1886 (3%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 |||| || | ||| | |||| |||| ||| | |||||||||||||| |||||||| | Sbjct 5269 TGAATTGAATGGGCTGGGCGGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTCTTGAGAC 5210 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 || |||| || || ||||||| || | ||| ||| | ||| Sbjct 5209 CAAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCAT-----------GCTCGG 5161 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCG 243919 | |||| || | |||||| |||||| ||| |||| ||| | |||| || || || Sbjct 5160 C-TCGCGCATGTGAATGTTGAGCGACTGGGACTGATCGATGAAAG-CGCCACGATCGGCA 5103 Query 243920 GCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978 ||||| | || ||| | |||||| || || | | |||||||||| | ||||| Sbjct 5102 GCCATCTGAACGACGGTGCG-CTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTGAT 5044 Query 243979 GT-GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037 | | ||||| | ||||||||| | ||| || | | |||||| || | Sbjct 5043 ATCGGTCGGG-ATGTTAGGGATGTTCTGGATCGAACCACCATCGGCGATGATGCGGTTCT 4985 Query 244038 GCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCA 244094 |||||| ||| ||| || |||| | | || ||| || | ||| | || | Sbjct 4984 TCATGTTGTCGGACCAGAGACCCATGTCGACAAGGTCCTT---CAAGAGCCAGGGGTTGA 4928 Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154 | ||||| ||||| || | || || || |||||||||| |||| || ||||||| Sbjct 4927 CAACCTGGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACGTGTAGGGCTCGA 4868 Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214 || || |||||||||| || |||| ||| || ||||||||||||| | |||| Sbjct 4867 AGCATTCGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGGGCGCGAGGAGCA 4808 Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274 ||||||| || || ||| || ||| | ||||| ||| ||||||||| | || Sbjct 4807 AGCTGTTCCGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCCAGTCCCAGAGGC 4748 Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334 | |||| || ||| | ||||||||| |||| || | |||| | || | Sbjct 4747 C-----GGTCGGCG----TGACGTTCCACATGTCGTACTGGAGGATACCCTGGGATACCG 4697 Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGA 244394 || || || ||||||| ||| | || | || |||||| | || || | Sbjct 4696 GGGATCCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGGTCA 4637 Query 244395 GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGG 244454 | || |||| ||||||||||||||||| ||| |||| || || |||| | | Sbjct 4636 GAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAGACT 4577 Query 244455 TGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGG 244514 ||| || |||| | | || ||| | |||||||| ||||| || |||| |||||||| Sbjct 4576 CGAAAGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGATGG 4517 Query 244515 GTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATC 244573 | | ||| ||| ||||| | | | | || | || || ||||| |||| ||||||| Sbjct 4516 GGCGGTGGCGCATGTTGCTGTTGTAAGCCTCCTGG-ACCGGGTAGTGGTTGACGTCGATG 4458 Query 244574 ACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC 244633 | |||||| |||||||| | | || |||| ||| |||| ||| ||||| || Sbjct 4457 ATCTTGTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTGGAAGTCATAG 4398 Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGG 244693 | | ||| | | || || || |||| ||||| | ||||||| Sbjct 4397 AC------ACCCTTG----TTGTAGTCG--ACGAACTGAGGAAGGGCCAGCGAGGCCAGG 4350 Query 244694 TTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTG 244753 ||||||||||| ||||| || | | ||||| || ||||| ||||| ||||| | Sbjct 4349 TTGCAGACGGCAACCTCGTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAG 4290 Query 244754 CACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGC 244813 | ||||||||| |||| || || ||| |||| ||||||| |||||||||||| Sbjct 4289 CTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGC 4230 Query 244814 ATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCC 244873 |||||||| ||||||||| ||| || |||||| | | |||||| | ||| Sbjct 4229 ATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGGCC 4170 Query 244874 TTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCG 244933 |||| ||| | ||| | ||| | |||||| |||||||||||||||||| Sbjct 4169 TTGATAGTCTTACGACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACTCG 4110 Query 244934 GGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCG 244993 || || ||| | |||||||||||| |||||||| ||| ||||||| ||| Sbjct 4109 TCACCATAGCAATCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCG 4050 Query 244994 CCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTG 245053 | || ||| | || ||||||||||||||| |||||||||||| ||||||| || | Sbjct 4049 TTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGA 3990 Query 245054 GTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACG 245113 | | || ||| ||| |||||| | || || | || |||||||||||| || Sbjct 3989 GCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCG 3930 Query 245114 TGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACC 245173 ||||| ||||| | ||||| || | ||| ||||| ||||||||||| || |||| | Sbjct 3929 TGCCAAGGCTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGGT----C 3874 Query 245174 ATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 | | | || ||| |||||||| || || | || | ||||| || || ||| Sbjct 3873 AACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCC 3814 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289 ||||||||| |||||| | || | | | || | | |||| | ||| | || Sbjct 3813 GTTGGTGCCGGCGATGTATGATCCAGTCGCACGGATGCGGTGGATGTTGAGGCCGATGCC 3754 Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349 ||| || |||||| || | |||||| |||| | |||| |||||||| ||||| Sbjct 3753 GCCTGCCATCTTGGAAATCATGGCGCAAGTCTTAAGACTGTCGTAGATGCCCTCGATGCT 3694 Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409 ||| |||||||| || ||| ||||| ||||| ||||||| || ||| | | | ||| Sbjct 3693 GTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTGGGCCTGAGGGGTACCGGCGTT 3634 Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGA- 245468 ||| || |||||| ||| || || ||| | | | || | || ||| |||| || Sbjct 3633 GAAGAGGGTGGGGGAGGCATGTGTGAAGAACTTGTTGGACATGAGGTTGTATGTCTCGAT 3574 Query 245469 GCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG-G 245527 | | || || | |||||| || ||| | ||| | ||||| ||||||| | Sbjct 3573 GACGCGC-TCCACGTTGTCTCCCCAGATGCCGACGGCAACACGCATGATCATGTGCTGTG 3515 Query 245528 GGCGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTG 245584 |||| |||| || || | | | ||| || | ||| |||||||| || |||||| Sbjct 3514 GGCG-CTCGACAATCTTGCCGTTGAG---CTTCAGGAGGTATGAGCGCTCCAGGGTCTTG 3459 Query 245585 AACCCAAAGTACGAGTAGCCAAAGTC 245610 || ||||||||| |||| ||||| Sbjct 3458 AAGCCAAAGTACTGGTAGTTGAAGTC 3433 >seq1383 Length=8527 Score = 408 bits (452), Expect = 8e-109 Identities = 619/861 (72%), Gaps = 30/861 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || |||||||||||||||||||||||| Sbjct 6913 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGACCTC 6972 Query 42360 GCCAAGGACACGGCCGGCTGGGAGT-CACTGTCTGAGA--ACGAAAAGTTTTTCCTCAAA 42416 |||||||| || |||| | || || || | || |||| ||| || Sbjct 6973 TCCAAGGACCTCCACGACTGGAACAACAAGATCAACGACGATGAGAAGTACTTCATCTCT 7032 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 |||| || || ||||||||||| || |||||||| ||||| |||||||||| | | Sbjct 7033 CACATCCTCGCTTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCGC 7092 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| ||||| ||| | ||||| ||||||||||||||||||||||| || Sbjct 7093 TTCAGCGGCGAGGTCCAGGTCCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGATG 7152 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCC 42593 |||||| | ||||||||| ||| || ||||||| |||| |||||| ||| || Sbjct 7153 GAGAACATCCACTCTGAGACCTACTCC---CTGCTCATTGACACCTACATCAAGGAGCCT 7209 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653 | | |||| | |||||||| ||||| || || || ||| |||| |||||||| Sbjct 7210 GCCCAGCGCACGCACCTGTTCAATGCCATCGACACCATCCCCGCCATCCGCAAGAAGGCC 7269 Query 42654 GACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGC 42712 |||||||| || |||||| | | || || | | || || | | || | ||||| || Sbjct 7270 GACTGGGCCCTGCGGTGGATC-ACTGACCAGAAGTCGACCTTTGCCCAGCGCCTGGTCGC 7328 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 ||| | || |||||||| ||||||||| || ||||| |||||||||||||||||||| Sbjct 7329 GTTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAA 7388 Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || || || |||||||| || |||||||| ||||| |||||| | ||||||| Sbjct 7389 GAAGCGCGGCCTC-ATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGG 7447 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA 42891 | || || | ||||| |||||||| ||||||||| ||||| | |||| | | | | Sbjct 7448 GTCTCCACACCGACTTCGCCTGCCTGCTGTTCTCG---CACCTTA---ACAACCGCCCCA 7501 Query 42892 AGGAGCGGGTC---CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948 ||| |||| || ||||||| || |||||| |||||| |||||||||||| Sbjct 7502 GCAAGCAGGTCATTGAGGACATCATCGTCGACGCCGTGCGCATCGAGCAGGAGTTCCTCA 7561 Query 42949 CGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATC 43007 | || | ||| ||||| ||||| ||||||||||| | |||| ||| ||||||| Sbjct 7562 CCGAGGCCCTG-CCGTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATT 7620 Query 43008 CAGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACG 43064 ||| ||||||||||| || || || ||| | || | || | | ||| || Sbjct 7621 GAGTTCGTCGCCGACCGCCTGCTCGTCGCC--CTCGGCAACGAGAAG-GTGTACCGGTCG 7677 Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124 | |||||||||||| |||||||||||||| | | |||||||||||||| |||||| Sbjct 7678 ACAAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAG 7737 Query 43125 AAGCGCGTCGCCGACTACCAG 43145 |||||||||| ||| |||||| Sbjct 7738 AAGCGCGTCGGCGAGTACCAG 7758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944267949607360