Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq979 259 6e-64 seq1383 123 3e-23 >seq979 Length=11123 Score = 259 bits (286), Expect = 6e-64 Identities = 1152/1802 (64%), Gaps = 27/1802 (1%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| ||||||||||| || |||||||| | | ||||| || Sbjct 5237 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTG 5178 Query 113657 AACTTGGAGAGTGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715 | |||| | || | | || | |||| | ||| | ||||| ||||||||||| Sbjct 5177 ATCTTGCCCA-TGCTCGGCTCGCGCATGTGAATGTTGAGCGACTGGGACTGATCGATGAA 5119 Query 113716 -GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTC 113774 ||| |||||||| || ||||| | || || | ||||||||| || || Sbjct 5118 AGCG-CCACGATCGGCAGCCATCTGAACGACGGTGCGCTGAGAGATTTCCCAAACGGTCT 5060 Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCT 113834 ||||||| ||| ||||| ||||| | ||| || ||||| || ||||| | Sbjct 5059 TGTAGAGAGCCTTGATATCGGTCGGGATGTTAGGGATGTTCTGGATCGAACCACCATCGG 5000 Query 113835 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 113894 || ||| | | |||||| | | ||||||||||| || | || |||| || || Sbjct 4999 CGATGATGCGGTTCTTCATGTTGTCGGACCAGAGACCCATGTCGACAAGGTCCTTCAAGA 4940 Query 113895 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 113954 | |||||||| |||||||| || | | || | | | ||||| |||| || Sbjct 4939 GCCAGGGGTTGACAACCTGGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACG 4880 Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014 |||| ||||| ||||| || ||||| |||| |||||| | || ||||| || ||||||| Sbjct 4879 TGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGG 4820 Query 114015 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCC 114074 | || | ||| | |||||| |||| ||| | ||| | || ||||||| ||||||| Sbjct 4819 GCGCGAGGAGCAAGCTGTTCCGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCC 4760 Query 114075 AGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGG 114134 |||| || | | | | | | |||||| || ||||||||||||| ||||| Sbjct 4759 AGTCCCAGAGGCCGGTCGGCGTGACGTTCCACATGTCGTACTGGAGGATACCCTGGGATA 4700 Query 114135 CTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 114194 | || ||||| ||| | ||| ||||| ||| | ||| |||| ||| | || Sbjct 4699 CCGGGGATCCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGG 4640 Query 114195 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 114254 || || |||||||| || ||||| || || | ||||| | |||||| | Sbjct 4639 TCAGAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAG 4580 Query 114255 AATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAA 114314 | || || | | || | | || |||| || || || |||||||||| ||| | Sbjct 4579 ACTCGAAAGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGA 4520 Query 114315 TTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGA 114374 | ||||| || | ||| || || ||| || || || || || |||| Sbjct 4519 TGGGGCGGTGGCGCATGTTGCTGTTGTAAGCCTCCTGGACCGGGTAGTGGTTGACGTCGA 4460 Query 114375 TAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAA 114434 | | | | || || || || || | | || ||| || ||||| | | | ||| Sbjct 4459 TGATCTTGTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTGGAAGTCAT 4400 Query 114435 AACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAG 114494 | | | | | | ||| ||| ||||||||| | || ||||| || || || | Sbjct 4399 AGACACCCTTGTTGTAGTCGACGAACTGAGGAAGGGCCAGCGAGGCCAGGTTGCAGACGG 4340 Query 114495 AGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGG 114554 ||| || | | |||||| || || || || |||| || || || |||| Sbjct 4339 CAACCTCGTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGGATGG 4280 Query 114555 TGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCG 114614 |||| | |||||| || || ||| ||| || ||||||||| |||||| | || Sbjct 4279 TGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGT 4220 Query 114615 TCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTG 114673 | || ||||| || || | || ||| || || | ||||| | | | | || | | ||| Sbjct 4219 TGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGGCCTTG-ATAGT- 4162 Query 114674 GCGTTGG--CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCA 114731 | | | | || || ||| ||||||||| || ||||| || ||||| ||||| Sbjct 4161 -CTTACGACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACTCGTCACCAT 4103 Query 114732 CGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCT 114791 | || | || || || || | ||||| | |||| ||| | || || || Sbjct 4102 AGCAATCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTCCGTTCTTCT 4043 Query 114792 CAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAG 114851 | |||||||||||||||||||| || |||||||| || ||||||||| ||| || Sbjct 4042 CGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGCGAGCACGGA 3983 Query 114852 CTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACG 114911 |||| || | || || || ||| | || | || || | || || |||||||| | Sbjct 3982 CTTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCAAG 3923 Query 114912 GTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCG 114968 | || ||||| | || | | || ||| ||| | |||| || || | | Sbjct 3922 GCTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCAACGTAGCGGG 3863 Query 114969 CTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCC 115027 | ||| || || || || ||||| || ||||| |||| || ||| || || || Sbjct 3862 CGGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCCGTTGGTGCCGG 3803 Query 115028 CGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCA 115086 ||| || || | | | || | || ||||||| | || || || |||||| Sbjct 3802 CGATGTATGATCC--AGTCGCACGGATGCGGTGGATGTTGAGGCCGATGCCGCCTGCCAT 3745 Query 115087 CTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTT 115146 ||| || || ||||| | | |||||| ||||||| || ||||| |||| |||| Sbjct 3744 CTTGGAAATCATGGCGCAAGTCTTAAGACTGTCGTAGATGCCCTCGATGCTGTCATCCTT 3685 Query 115147 ATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGG 115205 | ||| |||||||| || | || ||||| || ||||| ||||||||||||| Sbjct 3684 CATGTCGACCAGGAAGCAAGAGGAAAGCTG-GGCCTGAGGGGTACCGGCGTTGAAGAGGG 3626 Query 115206 TTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACG-GC 115263 | || | || || |||| | || | | |||||| | ||| ||||| | |||| || Sbjct 3625 TGGGGGAGGCATGTGTGAAGA-ACTTGTTGGACATGAGGTTGTATGTCTCGATGACGCGC 3567 Query 115264 GGGA--ATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTT 115321 | ||||| ||| | || |||| | || ||||| | ||||| || || Sbjct 3566 TCCACGTTGTCTCCCCAG---ATGCCGACGGCAACACGCATGATCATGTGCTGTGGGCGC 3510 Query 115322 TCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAA 115381 || | | | || | |||| || ||||||| ||||| |||||||| ||||| Sbjct 3509 TCGACAATCTTGCCGTTGAGCTTCAGGAGGTATGAGCGCTCCAGGGTCTTGAAGCCAAAG 3450 Query 115382 TA 115383 || Sbjct 3449 TA 3448 >seq1383 Length=8527 Score = 123 bits (136), Expect = 3e-23 Identities = 303/455 (67%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || || ||||||||||||||||| ||||| ||| | | ||| |||||||| Sbjct 7755 GTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGAGAGATGTTCTCCAT 7696 Query 125818 AAAATCAAATGGGTTCTTTGA--GTTCCAAATT---GTTGGCACCCCAATCTGTTTGAGG 125872 || || || ||||| | || | | || || |||| || | ||| Sbjct 7695 GAAGTCGAAGGGGTTTGTCGACCGGTACACCTTCTCGTTG-----CCGAGGGCGACGAGC 7641 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 || || || | |||| |||||||||||| |||| | |||||||| |||| ||| Sbjct 7640 AGGCGGTCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGG 7581 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 || || || || || || |||| ||| ||| || |||||| || | |||| Sbjct 7580 GCGCACGGCAGGGCCTCGGTGAGGAACTCCTGCTCGATGCGCACGGCGTCGACGATGATG 7521 Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAA 126051 | | |||| | | | || | ||| || || | ||| || ||| || Sbjct 7520 TCCTCAATGACCTGCTTGCTGGGGCGGTTGTT-AAGGTGCGAGAACAGCAGGCAGGCGAA 7462 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 || |||||||||||||||||| |||||||| || || |||||| ||| || ||||| Sbjct 7461 GTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCAT 7402 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 ||| || |||||||| | |||||| || | ||| | ||| ||||||||| ||||| Sbjct 7401 GAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTC 7342 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||| || ||||| | || |||| ||||||| Sbjct 7341 GACAGCAGCAAACGCGACCAGGCGCTGGGCAAAGG 7307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597308529670880