Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq88 102 8e-17
seq4893 91.5 1e-13
seq2035 84.2 2e-11
>seq88
Length=36327
Score = 102 bits (112), Expect = 8e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||| || || || | ||||| || ||||| || || || || |
Sbjct 32658 ACCACCACGCAGGCGAAGGACGAGGTGGAGGGTCGACTCCTTTTGGATATTATAGTCGGA 32599
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| | ||||||||||||| |||| || |||||||||||||| ||
Sbjct 32598 CAAAGTCCGACCATCTTCCAACTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCGGGCGG 32539
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | |||||| || |||||
Sbjct 32538 GATGCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTATCAGAGGACTCCAC 32479
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCA 64421
|| | || | ||||||||||||||
Sbjct 32478 CTCAAGGGTGATGGTCTTGCCGGTCA 32453
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || ||||||||||| || | | || || | || || || |||||||||||| ||
Sbjct 33077 TCCTTCTGAATGTTGTAGTCGGACAAAGTCCGACCATCCTCGAGTTGCTTGCCGGCAAAA 33018
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| || ||||||||||| ||||| || || || || ||||| || || ||| |||
Sbjct 33017 ATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCTTGGATCTTCGACTTCACATTG 32958
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | || || || | || | |||||| || |||| || || |||
Sbjct 32957 TCAATCGTGTCTGACGACTCAACCTCCAATGTGATGGTCTTTCCCGTCAGGGTCTTCACG 32898
Query 64433 AAAATTTGCAT 64443
||||| |||||
Sbjct 32897 AAAATCTGCAT 32887
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | || || || || | || ||| || || || |||||||| |
Sbjct 32886 ACCACCGCGCAGGCGCAGGACAAGGTGCAGAGTGCTTTCCTTCTGGATATTGTAATCCGA 32827
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | || || || || ||||| ||| |||| || ||||||||||| |||||
Sbjct 32826 AAGAGTGCGACCATCCTCGAGTTGTTTGCCCGCAAAAATCAGGCGCTGCTGGTCAGGAGG 32767
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| || || | || || | |||||
Sbjct 32766 AATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTGTCGGAAGACTCCAC 32707
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||| ||||||| || || ||||| ||||||||
Sbjct 32706 CTCGAGGGTGATAGTCTTCCCGGTCAGGGTCTTGACGAAGATTTGCAT 32659
>seq4893
Length=312
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 64224 GCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGC 64283
||| ||| ||||| | || | ||| || || || |||||||| || || || |
Sbjct 307 GCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCC 248
Query 64284 GCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTT 64343
|| |||| || | ||||||||| || |||| |||||||||||||| |||||||| || |
Sbjct 247 GCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCT 188
Query 64344 CTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAG 64403
| || || || || || ||| || || | || || | ||||| || | |
Sbjct 187 CCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAGCG 128
Query 64404 TTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| | |||||||| || | || |||||||| ||||||||
Sbjct 127 TAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 88
>seq2035
Length=5329
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || || |||||||| | || ||| | | || |||||||||||||| ||| |
Sbjct 1058 TCCTTCTGGATATTGTAATCCGAGAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAG 1117
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| || ||||||||||| || || || || || || || || || || ||| |||
Sbjct 1118 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 1177
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | ||| || | | ||||| || | || | |||||||| || | || || |||
Sbjct 1178 TCGATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACG 1237
Query 64433 AAAATTTGCAT 64443
|| || |||||
Sbjct 1238 AAGATCTGCAT 1248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499607101799840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |