Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq979 318 6e-82 >seq979 Length=11123 Score = 318 bits (352), Expect = 6e-82 Identities = 1090/1672 (65%), Gaps = 38/1672 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || |||||| || |||||||| ||| | | ||| Sbjct 3439 AACTACCAGTACTTTGGCTTCAAGACCCTGGAGCGCTCATACCTCCTGAAGCTCAACGGC 3498 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || |||||| || || || || | ||||| || ||| |||| || || || Sbjct 3499 AAGATTGTCGAGCGCCCACAGCACATGATCATGCGTGTTGCCGTCGGCATCTGGGGAGAC 3558 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 || || | || | | | | || |||| ||||| | || |||| | Sbjct 3559 AACGTGGAGCGCGTCATCGAGACATACAACCTCATGTCCAACAAGTTCTTCACACATG-C 3617 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | |||| ||||| |||||||| || ||||| | | ||| | || || || |||||| | Sbjct 3618 CTCCCCCACCCTCTTCAACGCCGGTACCCCTCAGGCCCAGCTTTCCTCTTGCTTCCTGGT 3677 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||| |||| || || | |||||| || ||| || || | | Sbjct 3678 CGAC-ATGAAGGATGACAGCATCGAGGGCATCTACGACAGTCTTAAGACTTGCGCCATGA 3736 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 | || || || || || ||||| ||| ||||| | | ||||| | || || | Sbjct 3737 TTTCCAAGATGGCAGGCGGCATCGGCCTCAACATCCACCGCATCCGTGCGACTGGATCAT 3796 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 ||||| ||| ||||| ||||| ||||| ||| || |||| |||||||| |||||||||| Sbjct 3797 ACATCGCCGGCACCAACGGCACTTCCAATGGCATCATCCCCATGCTCCGTGTCTTCAACA 3856 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || |||||||| ||||| ||||| | | | ||| | || || |||| | Sbjct 3857 ACACCGCCCGCTACGTTGACCAAGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTACC 3916 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 ||||||| |||||||| ||||| | ||| ||||||| || |||||||||||||| | Sbjct 3917 TCGAGCCTTGGCACGCCGACGTCTTTGAGTTCCTCGACCTCCGTAAGAACCACGGCAAGG 3976 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | | || | || |||||| || |||||| | || ||||| || ||||| | Sbjct 3977 AGGAAGTCCGTGCTCGCGATCTCTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGC 4036 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | |||||||| ||| | |||| ||| | || ||||| || || ||||| || ||| Sbjct 4037 GTGTCGAGAAGAACGGAGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCG 4096 Query 94373 ACGTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGC 94430 | | ||| | || || || | | |||||| ||||| | || || | || Sbjct 4097 ATTGCTATGG-TGACGAGTTCGAGGCCCTGTATGAGAAGTACGAGAAGGCCGGCCGCGGT 4155 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 | | ||| ||| | || ||||| ||| || ||| | || | ||| ||||| Sbjct 4156 C-GTAAGACTATCAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGAC 4214 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 || | |||| ||| | | |||||| | ||| |||| |||| ||||||| || ||| Sbjct 4215 CGGCAACCCCTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAGAAGAACC 4273 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 |||| ||| ||||| || |||||||| ||||| ||||||| | | || |||| Sbjct 4274 TCGGCACCATCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTCGGCACCCGACG 4333 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCAC-TTTCGTGCGAGATGCCTAC 94668 || |||| || || ||||||| ||| | ||| ||| | ||||| ||| |||| Sbjct 4334 AGGTTGCCGTCTGCAACCTGGCCTCGCTGGCCCT-TCCTCAGTTCGT-CGA-----CTAC 4386 Query 94669 ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTG 94728 | | | | || | || | || |||| | |||| | |||| Sbjct 4387 A--ACAAGGGTGTC-TATGACTTCCAGAAGCTGCACGAAGTCGCCCAAGTCGTGGTTCGC 4443 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 |||||||||| | | |||||| ||| |||||| |||| |||||| | ||| ||| Sbjct 4444 AACCTGAACAAGATCATCGACGTCAACCACTACCCGGTCCAGGAGGCTTACAACAGCAAC 4503 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 || || || ||||||||| |||| |||||||| | || || || | || | | Sbjct 4504 ATGCGCCACCGCCCCATCGGCGTCGGTGTCCAGGGCCTGGCCGATGCTTTCCTGGCGCTT 4563 Query 94849 CGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 || |||| | ||| ||| ||| || | ||||| | | || ||||| | ||| Sbjct 4564 CGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTGAATAAGCAAATCTTCGAGACCATC 4623 Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 ||| ||| ||| ||| || | | |||||| ||| || | |||| | Sbjct 4624 TATCACGCGGCTCTGACCGCCTCGTGCGATCTGGCCA---AGGA--GCAAGGCACA-TAC 4677 Query 94969 TCG---TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTG 95025 ||| | ||||| || | ||||| || | |||| |||| | ||| || Sbjct 4678 TCGACCTATGAAGGATCCCCGGTATCCCAGGGTATCCTCCAGTACGACATGTGGAACGTC 4737 Query 95026 AAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTG 95085 | ||| | || || | |||||||| || || || | | | | || ||||| Sbjct 4738 ACGCCGACCGGCCTCTGGGACTGGGACGCGCTCAAGGCCAAGATCAAGGAGCATGGTGTC 4797 Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 ||| |||| | || |||||||| || ||||| ||| |||| ||||| |||||| Sbjct 4798 CGGAACAGCTTGCTCCTCGCGCCCATGCCGACCGCCTCGACGTCGCAAATCCTGGGCAAC 4857 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 ||||| | ||||| |||| ||| |||||| | ||| | | || || | || || || Sbjct 4858 AACGAATGCTTCGAGCCCTACACGTCCAACATCTACCAGCGTCGTGTCTTGGCTGGTGAG 4917 Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGA 95264 |||| || ||||| ||| | ||||| || || | ||||| | ||| || Sbjct 4918 TTCCAGGTTGTCAACCCCTGGCTCTTGAAGGACCTTGTCGAC-ATGGGTCTCTGGTCCGA 4976 Query 95265 CAAGGTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAACATCCCGCAAAT 95321 ||| | ||||||| | | |||| | || || ||||||||||||| | || Sbjct 4977 CAACATGAAGAACCGCATCAT---CGCCGATGGTGGTTCGATCCAGAACATCCCTAACAT 5033 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 ||| || |||||||| |||||||||||||| ||||| ||| | |||||| Sbjct 5034 CCCGACCGATATCAAGGCTCTCTACAAGACCGTTTGGGAAATCTCTCAGCGC 5085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494685873134560