Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq979 318 6e-82
>seq979
Length=11123
Score = 318 bits (352), Expect = 6e-82
Identities = 1090/1672 (65%), Gaps = 38/1672 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || |||||| || |||||||| ||| | | |||
Sbjct 3439 AACTACCAGTACTTTGGCTTCAAGACCCTGGAGCGCTCATACCTCCTGAAGCTCAACGGC 3498
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||| || || || || | ||||| || ||| |||| || || ||
Sbjct 3499 AAGATTGTCGAGCGCCCACAGCACATGATCATGCGTGTTGCCGTCGGCATCTGGGGAGAC 3558
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893
|| || | || | | | | || |||| ||||| | || |||| |
Sbjct 3559 AACGTGGAGCGCGTCATCGAGACATACAACCTCATGTCCAACAAGTTCTTCACACATG-C 3617
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953
| |||| ||||| |||||||| || ||||| | | ||| | || || || |||||| |
Sbjct 3618 CTCCCCCACCCTCTTCAACGCCGGTACCCCTCAGGCCCAGCTTTCCTCTTGCTTCCTGGT 3677
Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
||| | |||| ||| |||| || || | |||||| || ||| || || | |
Sbjct 3678 CGAC-ATGAAGGATGACAGCATCGAGGGCATCTACGACAGTCTTAAGACTTGCGCCATGA 3736
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
| || || || || || ||||| ||| ||||| | | ||||| | || || |
Sbjct 3737 TTTCCAAGATGGCAGGCGGCATCGGCCTCAACATCCACCGCATCCGTGCGACTGGATCAT 3796
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
||||| ||| ||||| ||||| ||||| ||| || |||| |||||||| ||||||||||
Sbjct 3797 ACATCGCCGGCACCAACGGCACTTCCAATGGCATCATCCCCATGCTCCGTGTCTTCAACA 3856
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || |||||||| ||||| ||||| | | | ||| | || || |||| |
Sbjct 3857 ACACCGCCCGCTACGTTGACCAAGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATCTACC 3916
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
||||||| |||||||| ||||| | ||| ||||||| || |||||||||||||| |
Sbjct 3917 TCGAGCCTTGGCACGCCGACGTCTTTGAGTTCCTCGACCTCCGTAAGAACCACGGCAAGG 3976
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| | | || | || |||||| || |||||| | || ||||| || ||||| |
Sbjct 3977 AGGAAGTCCGTGCTCGCGATCTCTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGC 4036
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| |||||||| ||| | |||| ||| | || ||||| || || ||||| || |||
Sbjct 4037 GTGTCGAGAAGAACGGAGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGCCTTGCCG 4096
Query 94373 ACGTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGC 94430
| | ||| | || || || | | |||||| ||||| | || || | ||
Sbjct 4097 ATTGCTATGG-TGACGAGTTCGAGGCCCTGTATGAGAAGTACGAGAAGGCCGGCCGCGGT 4155
Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490
| | ||| ||| | || ||||| ||| || ||| | || | ||| |||||
Sbjct 4156 C-GTAAGACTATCAAGGCCCAAAAGCTCTGGTATGCCATCCTCGAGGCTCAGACCGAGAC 4214
Query 94491 GGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
|| | |||| ||| | | |||||| | ||| |||| |||| ||||||| || |||
Sbjct 4215 CGGCAACCCCTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAGAAGAACC 4273
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
|||| ||| ||||| || |||||||| ||||| ||||||| | | || ||||
Sbjct 4274 TCGGCACCATCCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACTCGGCACCCGACG 4333
Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCAC-TTTCGTGCGAGATGCCTAC 94668
|| |||| || || ||||||| ||| | ||| ||| | ||||| ||| ||||
Sbjct 4334 AGGTTGCCGTCTGCAACCTGGCCTCGCTGGCCCT-TCCTCAGTTCGT-CGA-----CTAC 4386
Query 94669 ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTG 94728
| | | | || | || | || |||| | |||| | ||||
Sbjct 4387 A--ACAAGGGTGTC-TATGACTTCCAGAAGCTGCACGAAGTCGCCCAAGTCGTGGTTCGC 4443
Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788
|||||||||| | | |||||| ||| |||||| |||| |||||| | ||| |||
Sbjct 4444 AACCTGAACAAGATCATCGACGTCAACCACTACCCGGTCCAGGAGGCTTACAACAGCAAC 4503
Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848
|| || || ||||||||| |||| |||||||| | || || || | || | |
Sbjct 4504 ATGCGCCACCGCCCCATCGGCGTCGGTGTCCAGGGCCTGGCCGATGCTTTCCTGGCGCTT 4563
Query 94849 CGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908
|| |||| | ||| ||| ||| || | ||||| | | || ||||| | |||
Sbjct 4564 CGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTGAATAAGCAAATCTTCGAGACCATC 4623
Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968
||| ||| ||| ||| || | | |||||| ||| || | |||| |
Sbjct 4624 TATCACGCGGCTCTGACCGCCTCGTGCGATCTGGCCA---AGGA--GCAAGGCACA-TAC 4677
Query 94969 TCG---TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTG 95025
||| | ||||| || | ||||| || | |||| |||| | ||| ||
Sbjct 4678 TCGACCTATGAAGGATCCCCGGTATCCCAGGGTATCCTCCAGTACGACATGTGGAACGTC 4737
Query 95026 AAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTG 95085
| ||| | || || | |||||||| || || || | | | | || |||||
Sbjct 4738 ACGCCGACCGGCCTCTGGGACTGGGACGCGCTCAAGGCCAAGATCAAGGAGCATGGTGTC 4797
Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145
||| |||| | || |||||||| || ||||| ||| |||| ||||| ||||||
Sbjct 4798 CGGAACAGCTTGCTCCTCGCGCCCATGCCGACCGCCTCGACGTCGCAAATCCTGGGCAAC 4857
Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205
||||| | ||||| |||| ||| |||||| | ||| | | || || | || || ||
Sbjct 4858 AACGAATGCTTCGAGCCCTACACGTCCAACATCTACCAGCGTCGTGTCTTGGCTGGTGAG 4917
Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGA 95264
|||| || ||||| ||| | ||||| || || | ||||| | ||| ||
Sbjct 4918 TTCCAGGTTGTCAACCCCTGGCTCTTGAAGGACCTTGTCGAC-ATGGGTCTCTGGTCCGA 4976
Query 95265 CAAGGTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAACATCCCGCAAAT 95321
||| | ||||||| | | |||| | || || ||||||||||||| | ||
Sbjct 4977 CAACATGAAGAACCGCATCAT---CGCCGATGGTGGTTCGATCCAGAACATCCCTAACAT 5033
Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
||| || |||||||| |||||||||||||| ||||| ||| | ||||||
Sbjct 5034 CCCGACCGATATCAAGGCTCTCTACAAGACCGTTTGGGAAATCTCTCAGCGC 5085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494685873134560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |