Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq979 246 3e-60
seq1383 107 2e-18
seq88 107 2e-18
seq4893 89.7 5e-13
seq2403 87.8 2e-12
>seq979
Length=11123
Score = 246 bits (272), Expect = 3e-60
Identities = 1004/1553 (65%), Gaps = 51/1553 (3%)
Strand=Plus/Minus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
||||||| || || ||||| || ||||| || || | | || | ||| ||| | |
Sbjct 4933 GGTTGACAACCTGGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACGTGTAGG 4874
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
| || ||| ||||||| ||||| || ||||| | ||| | |||||||||||| ||| |
Sbjct 4873 GCTCGAAGCATTCGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGGGCGCGA 4814
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207
| ||| ||||| | || ||| | || | | |||| | ||| | ||| ||||
Sbjct 4813 GGAGCAAGCTGTTCCGGACACCATGCTCCTTGATCTTGGCCTTGAGCGCGTCCCAGTCCC 4754
Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTA--ACACTCCTCGACTGGCGGG 153265
| || | | ||| || ||||||||||||||||||| | | || ||| | | ||||
Sbjct 4753 AGAGGCCGGTCGGCGTGACGTTCCACATGTCGTACTGGAGGATAC-CCTGGGATACCGGG 4695
Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGCC--TC 153322
| || || | || ||| |||| | | | |||| |||| ||||| | || | ||
Sbjct 4694 GAT-CCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGG-CCAGATCGCA-CGAGGCGGTC 4638
Query 153323 -GAGC-GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCG 153380
|||| ||| |||| ||||| ||| |||||| ||||| || | || ||
Sbjct 4637 AGAGCCGCGTGATAG---ATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGA 4581
Query 153381 CTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCG 153440
|||| | |||||||| ||| || || || |||||||| ||||||| ||||||||||
Sbjct 4580 GACTCGAAAGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCG 4521
Query 153441 ATGGGTCGATGCTTCTCGTTGCTGC-----GCCTCGCGCTCGCTATGGGATAGTGATTGC 153495
||||| || || | ||||||| ||||| || | | || ||||| |||
Sbjct 4520 ATGGGGCGGTGGCGCATGTTGCTGTTGTAAGCCTC---CTGG--ACCGGGTAGTGGTTGA 4466
Query 153496 GATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGA 153555
||||| || ||||| |||||||| ||||| |||| | | | | || |||| ||
Sbjct 4465 CGTCGATGATCTTGTTCAGGTTGCGAACCACGACTTGGGCGACTTCGTGCAGCTTCTGGA 4406
Query 153556 AATCATAGGT---CATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGAT 153612
| |||||| | | | || | || ||| | || | ||| | || ||||| |
Sbjct 4405 AGTCATAGACACCCTTGTTGTAGTCG---ACGAACTGAGGAAGGGCCAGCGAGGCCAGGT 4349
Query 153613 TACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGC 153672
| |||||||| ||| |||| | ||||| | |||||| | ||| |||||| ||
Sbjct 4348 TGCAGACGGCAACCTCGTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGGAGC 4289
Query 153673 ATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCA 153732
||| ||| | || | ||| ||||| ||||| ||||| || ||| ||||||
Sbjct 4288 TGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCA 4229
Query 153733 TGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCG 153789
|| | || |||||||||| || | |||| ||| | ||| || | || |
Sbjct 4228 TGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGC---TTTTGGG 4172
Query 153790 CTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACT 153849
| | || ||| |||||| | ||||||| ||| ||||| ||| ||||
Sbjct 4171 CCTTGATAGTCTTACGACCGCGGCCGGCCTTCTCGTACTTCTCATACAGGGCCTCGAACT 4112
Query 153850 CGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATAT 153909
|||| || ||||| ||||| |||||||| |||| | || |||||||| | ||||
Sbjct 4111 CGTCACCATAGCAATCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCTC 4052
Query 153910 CGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGC 153969
||| | ||| || |||||| || || || | |||||| || | ||| ||||
Sbjct 4051 CGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAGAGATCGC 3992
Query 153970 GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGA--TTGAGCACGCTATAGATGTC 154027
| || | |||||| ||| ||| || | || | ||| | | ||| |||
Sbjct 3991 GAGCACGGACTTCCTCCTTGCCGTGGTTC--TTACGGAGGTCGAGGAACTCAAAGACGTC 3934
Query 154028 GGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATC 154084
||||||||| || || | ||||| ||| | |||||| |||| || || || || ||
Sbjct 3933 GGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTC 3874
Query 154085 GACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCC 154144
|||| ||| | | ||||||||||| || | |||||| | ||| | | |||||
Sbjct 3873 AACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGTGCC 3814
Query 154145 GTTGGTCGAATTGATCT-TGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGC 154203
|||||| ||| | || | || || || | | || | ||| | ||| ||||
Sbjct 3813 GTTGGTGCCGGCGATGTATGAT-CCAGTCGCACGGATGCGGTGGATGTTGAGGCCGATGC 3755
Query 154204 CGCC-GCCGTACTTTGATATGGCAGCGC-AGTCGCCCAGCGTCCTGTAGATGCCGTCGAT 154261
|||| ||| | ||| || || |||| |||| || | ||||||||| |||||
Sbjct 3754 CGCCTGCCAT-CTTGGAAATCATGGCGCAAGTC-TTAAGACTGTCGTAGATGCCCTCGAT 3697
Query 154262 GCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGC 154321
||| || || | | ||| || ||| || || | | || || || | | | |||
Sbjct 3696 GCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTG-GGCCTGAGGGGTACCGG 3638
Query 154322 CG-AAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTT 154380
|| ||||||||||| || || || || | || | | ||| | | ||| || |
Sbjct 3637 CGTTGAAGAGGGTGGGGGAGGCATGTGTGAAGAACTTGTTGGACATGAGGTTGTATGTCT 3578
Query 154381 CGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCT 154440
||||| || || | | || || ||||||| || || ||||||| ||||||||
Sbjct 3577 CGATGACGCGCTCCACGTTGTCTCCCCAGATGCCGACGGCAACACGCATGATCATGTGCT 3518
Query 154441 GCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGT 154500
| || || ||| | | | || | ||||| ||| ||| || ||||| |||
Sbjct 3517 GTGGGCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTATGAGCGCTCCAGGGTCTTGA 3458
Query 154501 AACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCGCATCGAGC 154553
| || || |||| ||| | || || | |||| | ||||||| ||||||
Sbjct 3457 AGCCAAAGTACTGGTAGTTGAAGTCCCGGTCATAGACAATGGCCGAGTCGAGC 3405
>seq1383
Length=8527
Score = 107 bits (118), Expect = 2e-18
Identities = 494/766 (64%), Gaps = 31/766 (4%)
Strand=Plus/Plus
Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145
||||| || ||| || || ||| ||| | | || ||||||||||| | || ||
Sbjct 7006 AACGACGATGAGAAGTACTTCATCTCTCACATCCTCGCTTTCTTCGCCGCGTCGGACGGC 7065
Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTCG-AGGCGCA 52204
||||| ||| ||||| ||||| | | |||||| | ||| | | || |||| |
Sbjct 7066 ATCGTCAACGAGAACCTGGTCGAGCGCTT-CAGCGGCGAGGTCCAGGTCCCGGAGGCTCG 7124
Query 52205 ATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCT 52264
| ||| || || || | | || ||| | | ||| | |||| ||| |||||
Sbjct 7125 CTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCTGAGACCTACTCCCTGCT 7184
Query 52265 CATTGAGCAGCTG-ATAAAAGA---TGAGCACGAGCGCGACACGCTGCTGAATGCGTTCG 52320
|||||| || || || || || || || | || || ||| ||| | ||||| |||
Sbjct 7185 CATTGA-CACCTACATCAAGGAGCCTGCCCA-GCGCACG-CAC-CTGTTCAATGCCATCG 7240
Query 52321 AGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACA 52380
| | | || | | ||||| ||||| | ||||| || ||||||| | | |
Sbjct 7241 ACACCATCCCCGCCATCCGCAAGAAGGCCGACTGGGCCCTGCGGTGGATCACTGACCAGA 7300
Query 52381 CCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCG 52440
| || | ||| ||||| |||| || || || |||||||| | || || ||
Sbjct 7301 AGTCGACCTTTGCCCAGCGCCTGGTCGCGTTTGCTGCTGTCGAGGGTATCTTCTTCAGCG 7360
Query 52441 GCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCA 52500
| ||||||| ||||||| | | || | | ||| | |||||||||||||| |||
Sbjct 7361 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCT 7420
Query 52501 GCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CTACTAC 52559
||||||| | || ||||| ||||| || || ||||| ||||| || ||||| || |
Sbjct 7421 CCAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTGTT-- 7478
Query 52560 AAGACGCGCGTGACCGAAAAATTGGATTCGG---ACACGATCCTGAG--CATGTTCAAGG 52614
| ||| ||| || | | | | || | |||| ||| || |
Sbjct 7479 ----CTCGC---ACCTTAACAACCGCCCCAGCAAGCAGGTCATTGAGGACATCATCGTCG 7531
Query 52615 AGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCA 52674
| || ||| ||||| ||||||| | || | || |||||| || ||||| ||||
Sbjct 7532 ACGCCGTGCGCATCGAGCAGGAGTTCCTCACCGAGGCCCTGCCGTGCGCCCTGCTCGGCA 7591
Query 52675 TGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGC 52734
||||| | | ||| ||||||| ||||| || || || || ||| | || |
Sbjct 7592 TGAACTCCAACCTGATGAAGCAGTACATTGAGTTCGTCGCCGACCGCCTGCTCGTCGCCC 7651
Query 52735 TCGGGCAGCCA-AAGTACTTCAACGCTCG--CAATCCGTTTGAGTTTATGAACAACATTT 52791
|| |||| | | ||| | | || ||| || || || || || ||| | ||||| |
Sbjct 7652 TC-GGCAACGAGAAG--GTGTACCGGTCGACAAACCCCTTCGACTTCATGGAGAACATCT 7708
Query 52792 CGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
| || | |||||||||||||| ||||||||||| |||||||||||
Sbjct 7709 CTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGAGTA 7754
>seq88
Length=36327
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| ||||||||||||||| || ||| || ||||||||||| || |||| | |
Sbjct 33078 CTCCTTCTGAATGTTGTAGTCGGACAAAGTCCGACCATCCTCGAGTTGCTTGCCGGCAAA 33019
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541
|| || ||||| ||||| ||||| ||||| || || || ||| || || | |||
Sbjct 33018 AATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCTTGGATCTTCGACTTCACATT 32959
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
| || | ||||| | |||||| ||||| | || | || || || ||||| || || |
Sbjct 32958 G-TCAATCGTGTCTGACGACTCAACCTCCAATGTGATGGTCTTTCCCGTCAGGGTCTTCA 32900
Query 138602 CAAAAATCTGCAT 138614
| |||||||||||
Sbjct 32899 CGAAAATCTGCAT 32887
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483
||||| || || ||||| || | ||| || |||||||||||||| || | | |
Sbjct 32849 TCCTTCTGGATATTGTAATCCGAAAGAGTGCGACCATCCTCGAGTTGTTTGCCCGCAAAA 32790
Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TT 138541
|| || ||||| ||||| ||||| ||||| || ||||| ||| || | |||| ||
Sbjct 32789 ATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTC-GACTTAACGTT 32731
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
|| | | |||||||| ||||||||||||| || | || || || ||||| || || |
Sbjct 32730 GT-CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCGGTCAGGGTCTTGA 32672
Query 138602 CAAAAATCTGCAT 138614
| || || |||||
Sbjct 32671 CGAAGATTTGCAT 32659
>seq4893
Length=312
Score = 89.7 bits (98), Expect = 5e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||| | ||| ||| |||||| | || || || | |
Sbjct 279 CTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAA 220
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542
|| || ||||| ||||||||||| || || || ||||| ||| || || | |
Sbjct 219 AATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 160
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||| | ||||||||| | ||| | ||| || ||||| || || |||||
Sbjct 159 GTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTAC 100
Query 138603 AAAAATCTGCAT 138614
|| || |||||
Sbjct 99 GAAGATTTGCAT 88
>seq2403
Length=4098
Score = 87.8 bits (96), Expect = 2e-12
Identities = 135/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| |||||||||||||| | ||| || |||||||| ||||| || | | |||
Sbjct 2169 CCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCGAGCTGTTTGCCCGCAAAGA 2228
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543
| || ||||| ||||| || || || || || ||||| ||| || || | ||||
Sbjct 2229 TCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTG- 2287
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | |||||| | ||||| ||||||| || | || ||||| || || || || ||
Sbjct 2288 TCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACG 2347
Query 138604 AAAATCTGCA 138613
|| |||||||
Sbjct 2348 AAGATCTGCA 2357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496224957001920
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